Difference between revisions of "TSS:Mm 168375.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_139297 | + | |UGPase= |
| + | |all_trans=NM_139297:199 AK185393:303 BC061208:315 AK213550:-337 AK209798:348 AK196595:349 AK197624:349 ENSMUST00000102875.10:351 AF424698:351 AK033445:353 ENSMUST00000060895.5:-370 BC025585:-370 NM_001290634:-436 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-200 | |distance_to_tss=-200 | ||
|end=21370831 | |end=21370831 | ||
| + | |end_of_center_position=21370830 | ||
|entrez_id=216558 | |entrez_id=216558 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=UDPGP | + | |gene_alias=UDPGP{{!}}UGPase |
|gene_description=UDP-glucose pyrophosphorylase 2 | |gene_description=UDP-glucose pyrophosphorylase 2 | ||
|gene_id=216558 | |gene_id=216558 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_139297 | |nearest_refseq=NM_139297 | ||
|nearest_unigene=Mm.28877 | |nearest_unigene=Mm.28877 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=mouse | |species=mouse | ||
|start=21370827 | |start=21370827 | ||
| + | |start_of_center_position=21370829 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_139297 | + | |transcript_name=NM_139297.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_168375.1 | |tss_id=mm_168375.1 | ||
Latest revision as of 11:30, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 21370829 |
|---|---|
| End of the center position in the TSS region: | 21370830 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_139297.6 |
|---|---|
| Distance: | 199 |
| Num_trans: | 13 |
| All_trans: | NM_139297:199 AK185393:303 BC061208:315 AK213550:-337 AK209798:348 AK196595:349 AK197624:349 ENSMUST00000102875.10:351 AF424698:351 AK033445:353 ENSMUST00000060895.5:-370 BC025585:-370 NM_001290634:-436 |
TATA-Box annotation
| Distance to TSS: | -200 |
|---|---|
| Nearest PromoterID: | NM_139297 |
| Entrez ID: | 216558 |
| Nearest Unigene: | Mm.28877 |
| Nearest Refseq: | NM_139297 |
| Nearest Ensembl: | ENSMUSG00000001891 |
| Gene Name: | UDP-glucose pyrophosphorylase 2 |
| Gene Alias: | UDPGP|UGPase |
| Gene Description: | UDP-glucose pyrophosphorylase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
