Difference between revisions of "TSS:Mm 16939.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000192361.1:207 uc008iko.1:207 AK138658:207 |chr=chr2 |cpg_percent=0.01 |distance=207 |distance_to_tss=19300 |end=14739956 |entrez_id=625342 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3641917 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=19300 | |distance_to_tss=19300 | ||
|end=14739956 | |end=14739956 | ||
| + | |end_of_center_position=14739943 | ||
|entrez_id=625342 | |entrez_id=625342 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=lactate dehydrogenase A pseudogene | |gene_description=lactate dehydrogenase A pseudogene | ||
|gene_id=100038578 | |gene_id=100038578 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_028497 | |nearest_refseq=NR_028497 | ||
|nearest_unigene=Mm.484784 | |nearest_unigene=Mm.484784 | ||
| − | |num_trans= | + | |num_trans=100038578 |
|species=mouse | |species=mouse | ||
|start=14739928 | |start=14739928 | ||
| + | |start_of_center_position=14739942 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000192361 | + | |transcript_name=ENSMUST00000192361.1 AK138658 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_16939.1 | |tss_id=mm_16939.1 | ||
Latest revision as of 11:52, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 14739942 |
|---|---|
| End of the center position in the TSS region: | 14739943 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000192361.1 AK138658 |
|---|---|
| Distance: | 207 |
| Num_trans: | 100038578 |
| All_trans: | MGI:3641917 |
TATA-Box annotation
| Distance to TSS: | 19300 |
|---|---|
| Nearest PromoterID: | NR_028497 |
| Entrez ID: | 625342 |
| Nearest Unigene: | Mm.484784 |
| Nearest Refseq: | NR_028497 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene 10848 |
| Gene Alias: | - |
| Gene Description: | lactate dehydrogenase A pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.01 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
