Difference between revisions of "TSS:Hg 107369.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|PPAPDC1= | |PPAPDC1= | ||
|PPAPDC1A= | |PPAPDC1A= | ||
| − | |all_trans= | + | |all_trans=NR_134516:-16 NM_001318169:-16 NM_001318168:-16 NM_001318167:-16 NM_001318166:-16 BC101267:89 BC101269:89 BC122535:89 BC101268:89 BC132787:149 ENST00000398250.6:245 NM_001030059:245 AK296273:265 HQ258170:319 KJ895775:319 KJ903972:319 AK310178:321 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 8: | Line 8: | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
|end=120456982 | |end=120456982 | ||
| + | |end_of_center_position=120456976 | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=DPPL2 | + | |gene_alias=DPPL2{{!}}PPAPDC1{{!}}PPAPDC1A |
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
|gene_id=196051 | |gene_id=196051 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:23531 | |hgnc_mgi_id=HGNC:23531 | ||
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001030059 |
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=120456969 | |start=120456969 | ||
| + | |start_of_center_position=120456975 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NR_134516.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_107369.1 | |tss_id=hg_107369.1 | ||
Latest revision as of 20:13, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120456975 |
|---|---|
| End of the center position in the TSS region: | 120456976 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_134516.1 |
|---|---|
| Distance: | -16 |
| Num_trans: | 17 |
| All_trans: | NR_134516:-16 NM_001318169:-16 NM_001318168:-16 NM_001318167:-16 NM_001318166:-16 BC101267:89 BC101269:89 BC122535:89 BC101268:89 BC132787:149 ENST00000398250.6:245 NM_001030059:245 AK296273:265 HQ258170:319 KJ895775:319 KJ903972:319 AK310178:321 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_001030059 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | phospholipid phosphatase 4 |
| Gene Alias: | DPPL2|PPAPDC1|PPAPDC1A |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
