Difference between revisions of "TSS:Hg 108743.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 5: | Line 5: | ||
|SSH3BP= | |SSH3BP= | ||
|SSH3BP1= | |SSH3BP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:11320 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 11: | Line 11: | ||
|distance_to_tss=104 | |distance_to_tss=104 | ||
|end=26860991 | |end=26860991 | ||
| + | |end_of_center_position=26860984 | ||
|entrez_id=10006 | |entrez_id=10006 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=ABI-1 | + | |gene_alias=ABI-1{{!}}ABLBP4{{!}}E3B1{{!}}NAP1BP{{!}}SSH3BP{{!}}SSH3BP1 |
|gene_description=abl interactor 1 | |gene_description=abl interactor 1 | ||
|gene_id=10006 | |gene_id=10006 | ||
| Line 23: | Line 24: | ||
|hgnc_mgi_id=HGNC:11320 | |hgnc_mgi_id=HGNC:11320 | ||
|nearest_ensembl=ENSG00000136754 | |nearest_ensembl=ENSG00000136754 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001178124 |
|nearest_refseq=NM_005470 | |nearest_refseq=NM_005470 | ||
|nearest_unigene=Hs.508148 | |nearest_unigene=Hs.508148 | ||
| − | |num_trans= | + | |num_trans=10006 |
|species=human | |species=human | ||
|start=26860975 | |start=26860975 | ||
| + | |start_of_center_position=26860983 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000376166.5 | + | |transcript_name=ENST00000376166.5 ENST00000346832.10 AK126803 AF260262 AK298646 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_108743.1 | |tss_id=hg_108743.1 | ||
Latest revision as of 20:42, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26860983 |
|---|---|
| End of the center position in the TSS region: | 26860984 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376166.5 ENST00000346832.10 AK126803 AF260262 AK298646 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10006 |
| All_trans: | HGNC:11320 |
TATA-Box annotation
| Distance to TSS: | 104 |
|---|---|
| Nearest PromoterID: | NM_001178124 |
| Entrez ID: | 10006 |
| Nearest Unigene: | Hs.508148 |
| Nearest Refseq: | NM_005470 |
| Nearest Ensembl: | ENSG00000136754 |
| Gene Name: | abl interactor 1 |
| Gene Alias: | ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 |
| Gene Description: | abl interactor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
