Difference between revisions of "TSS:Mm 39204.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000151836.7:13 ENSMUST00000126009.1:34 |chr=chr4 |cpg_percent=0.025 |distance=13 |distance_to_tss=5323 |end=156031674 |entrez_id=21936 |gc_perc...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Gitr= |
| + | |all_trans=MGI:3802048 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=8 |
| − | |distance_to_tss= | + | |distance_to_tss=5343 |
|end=156031674 | |end=156031674 | ||
| + | |end_of_center_position=156031665 | ||
|entrez_id=21936 | |entrez_id=21936 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=AITR | + | |gene_alias=AITR{{!}}Gitr |
| − | |gene_description= | + | |gene_description=tumor necrosis factor receptor superfamily, member 18 |
| − | |gene_id= | + | |gene_id=100038526 |
|gene_name=predicted gene 16008 | |gene_name=predicted gene 16008 | ||
|gene_source=MGI:3802048 | |gene_source=MGI:3802048 | ||
|gene_symbol=Gm16008 | |gene_symbol=Gm16008 | ||
| − | |gene_synonyms= | + | |gene_synonyms=Gm10560 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3802048 | |hgnc_mgi_id=MGI:3802048 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_009400 | |nearest_refseq=NM_009400 | ||
|nearest_unigene=Mm.3180 | |nearest_unigene=Mm.3180 | ||
| − | |num_trans= | + | |num_trans=100038526 |
|species=mouse | |species=mouse | ||
|start=156031655 | |start=156031655 | ||
| + | |start_of_center_position=156031664 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=KY468034 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_39204.1 | |tss_id=mm_39204.1 | ||
Latest revision as of 21:20, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 156031664 |
|---|---|
| End of the center position in the TSS region: | 156031665 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KY468034 |
|---|---|
| Distance: | 8 |
| Num_trans: | 100038526 |
| All_trans: | MGI:3802048 |
TATA-Box annotation
| Distance to TSS: | 5343 |
|---|---|
| Nearest PromoterID: | NM_021985 |
| Entrez ID: | 21936 |
| Nearest Unigene: | Mm.3180 |
| Nearest Refseq: | NM_009400 |
| Nearest Ensembl: | ENSMUSG00000041954 |
| Gene Name: | predicted gene 16008 |
| Gene Alias: | AITR|Gitr |
| Gene Description: | tumor necrosis factor receptor superfamily, member 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
