Difference between revisions of "TSS:Hg 10299.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |FBX30= | ||
| + | |FBX6A= | ||
| + | |Fbx44= | ||
| + | |Fbxo6a= | ||
| + | |all_trans=HGNC:13581 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| − | |distance_to_tss= | + | |distance=-1 |
| + | |distance_to_tss=3 | ||
| + | |end=11654414 | ||
| + | |end_of_center_position=11654410 | ||
|entrez_id=93611 | |entrez_id=93611 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=FBG3 | + | |gene_alias=FBG3{{!}}FBX30{{!}}FBX6A{{!}}Fbx44{{!}}Fbxo6a |
|gene_description=F-box protein 44 | |gene_description=F-box protein 44 | ||
| − | |gene_name= | + | |gene_id=26232 |
| + | |gene_name=F-box protein 2 | ||
| + | |gene_source=HGNC:13581 | ||
| + | |gene_symbol=FBXO2 | ||
| + | |gene_synonyms=FBX2 Fbg1 Fbs1 Nfb42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13581 | ||
|nearest_ensembl=ENSG00000132879 | |nearest_ensembl=ENSG00000132879 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_183412 |
|nearest_refseq=NM_033182 | |nearest_refseq=NM_033182 | ||
|nearest_unigene=Hs.556006 | |nearest_unigene=Hs.556006 | ||
| − | |tata_box= | + | |num_trans=26232 |
| + | |species=human | ||
| + | |start=11654405 | ||
| + | |start_of_center_position=11654409 | ||
| + | |strand=- | ||
| + | |tata_box=-53(GGCCTTTAAGAG,-,0.00),-52(GCCTTTAAGAGG,-,0.00),-51(CCTTTAAGAGGC,+,0.00) | ||
| + | |transcript_name=BC025233 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10299.1 | |tss_id=hg_10299.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:39, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11654409 |
|---|---|
| End of the center position in the TSS region: | 11654410 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC025233 |
|---|---|
| Distance: | -1 |
| Num_trans: | 26232 |
| All_trans: | HGNC:13581 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_183412 |
| Entrez ID: | 93611 |
| Nearest Unigene: | Hs.556006 |
| Nearest Refseq: | NM_033182 |
| Nearest Ensembl: | ENSG00000132879 |
| Gene Name: | F-box protein 2 |
| Gene Alias: | FBG3|FBX30|FBX6A|Fbx44|Fbxo6a |
| Gene Description: | F-box protein 44 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -53(GGCCTTTAAGAG,-,0.00),-52(GCCTTTAAGAGG,-,0.00),-51(CCTTTAAGAGGC,+,0.00) |
