Difference between revisions of "TSS:Mm 44533.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000193014.1:0 ENSMUST00000195796.1:0 AK153723:0 |chr=chr5 |cpg_percent=0.105 |distance=0 |distance_to_tss=-453 |end=24451746 |entrez_id=213990...") |
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |AV028425= |
| + | |Centg3= | ||
| + | |Crag= | ||
| + | |Crag.= | ||
| + | |MRIP-1= | ||
| + | |all_trans=MGI:3642883 | ||
|chr=chr5 | |chr=chr5 | ||
| + | |cnt-g3= | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=-453 | |distance_to_tss=-453 | ||
|end=24451746 | |end=24451746 | ||
| + | |end_of_center_position=24451725 | ||
|entrez_id=213990 | |entrez_id=213990 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=AGAP-3 | + | |gene_alias=AGAP-3{{!}}AV028425{{!}}Centg3{{!}}Crag{{!}}Crag.{{!}}MRIP-1{{!}}cnt-g3 |
| − | |gene_description= | + | |gene_description=ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 |
|gene_id=100038444 | |gene_id=100038444 | ||
|gene_name=predicted gene 10472 | |gene_name=predicted gene 10472 | ||
| Line 18: | Line 25: | ||
|hgnc_mgi_id=MGI:3642883 | |hgnc_mgi_id=MGI:3642883 | ||
|nearest_ensembl=ENSMUSG00000023353 | |nearest_ensembl=ENSMUSG00000023353 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359881 |
|nearest_refseq=NM_139153 | |nearest_refseq=NM_139153 | ||
|nearest_unigene=Mm.250703 | |nearest_unigene=Mm.250703 | ||
| − | |num_trans= | + | |num_trans=100038444 |
|species=mouse | |species=mouse | ||
|start=24451702 | |start=24451702 | ||
| + | |start_of_center_position=24451724 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000193014.1 ENSMUST00000195796.1 AK153723 | |transcript_name=ENSMUST00000193014.1 ENSMUST00000195796.1 AK153723 | ||
Latest revision as of 23:18, 27 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24451724 |
|---|---|
| End of the center position in the TSS region: | 24451725 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000193014.1 ENSMUST00000195796.1 AK153723 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100038444 |
| All_trans: | MGI:3642883 |
TATA-Box annotation
| Distance to TSS: | -453 |
|---|---|
| Nearest PromoterID: | NM_001359881 |
| Entrez ID: | 213990 |
| Nearest Unigene: | Mm.250703 |
| Nearest Refseq: | NM_139153 |
| Nearest Ensembl: | ENSMUSG00000023353 |
| Gene Name: | predicted gene 10472 |
| Gene Alias: | AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 |
| Gene Description: | ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
