Difference between revisions of "TSS:Hg 10303.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=264 |entrez_id=10459 |gc_percent=0.691542 |gene_alias=FANCV|MAD2B|POLZ2|REV7 |gene_description=MAD2 mitotic arrest deficient-li...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |MAD2B= | ||
| + | |POLZ2= | ||
| + | |REV7= | ||
| + | |all_trans=HGNC:6764 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance_to_tss= | + | |distance=-133 |
| + | |distance_to_tss=198 | ||
| + | |end=11680978 | ||
| + | |end_of_center_position=11680951 | ||
|entrez_id=10459 | |entrez_id=10459 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=FANCV | + | |gene_alias=FANCV{{!}}MAD2B{{!}}POLZ2{{!}}REV7 |
| − | |gene_description= | + | |gene_description=mitotic arrest deficient 2 like 2 |
| − | |gene_name=MAD2L2 | + | |gene_id=10459 |
| + | |gene_name=mitotic arrest deficient 2 like 2 | ||
| + | |gene_source=HGNC:6764 | ||
| + | |gene_symbol=MAD2L2 | ||
| + | |gene_synonyms=FANCV MAD2B POLZ2 REV7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6764 | ||
|nearest_ensembl=ENSG00000116670 | |nearest_ensembl=ENSG00000116670 | ||
|nearest_promoter_id=NM_006341 | |nearest_promoter_id=NM_006341 | ||
|nearest_refseq=NM_006341 | |nearest_refseq=NM_006341 | ||
|nearest_unigene=Hs.19400 | |nearest_unigene=Hs.19400 | ||
| − | |tata_box= | + | |num_trans=10459 |
| + | |species=human | ||
| + | |start=11680922 | ||
| + | |start_of_center_position=11680950 | ||
| + | |strand=- | ||
| + | |tata_box=71(CCTTTTCGGGGG,+,0.00) | ||
| + | |transcript_name=ENST00000445656.5 ENST00000376664.10 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10303.1 | |tss_id=hg_10303.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B1AK43 | ||
}} | }} | ||
Latest revision as of 18:40, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11680950 |
|---|---|
| End of the center position in the TSS region: | 11680951 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000445656.5 ENST00000376664.10 |
|---|---|
| Distance: | -133 |
| Num_trans: | 10459 |
| All_trans: | HGNC:6764 |
TATA-Box annotation
| Distance to TSS: | 198 |
|---|---|
| Nearest PromoterID: | NM_006341 |
| Entrez ID: | 10459 |
| Nearest Unigene: | Hs.19400 |
| Nearest Refseq: | NM_006341 |
| Nearest Ensembl: | ENSG00000116670 |
| Gene Name: | mitotic arrest deficient 2 like 2 |
| Gene Alias: | FANCV|MAD2B|POLZ2|REV7 |
| Gene Description: | mitotic arrest deficient 2 like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 71(CCTTTTCGGGGG,+,0.00) |
