Difference between revisions of "TSS:Hg 103041.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=102726 |entrez_id=7410 |gc_percent=0.616915 |gene_alias=VAV-2 |gene_description=vav guanine nucleotide exchange factor 2 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=NA | ||
|distance_to_tss=102726 | |distance_to_tss=102726 | ||
| + | |end=133889602 | ||
| + | |end_of_center_position=133889599 | ||
|entrez_id=7410 | |entrez_id=7410 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000160293 | |nearest_ensembl=ENSG00000160293 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001134398 |
|nearest_refseq=NM_003371 | |nearest_refseq=NM_003371 | ||
|nearest_unigene=Hs.369921 | |nearest_unigene=Hs.369921 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=133889594 | ||
| + | |start_of_center_position=133889598 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103041.1 | |tss_id=hg_103041.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:17, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133889598 |
|---|---|
| End of the center position in the TSS region: | 133889599 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 102726 |
|---|---|
| Nearest PromoterID: | NM_001134398 |
| Entrez ID: | 7410 |
| Nearest Unigene: | Hs.369921 |
| Nearest Refseq: | NM_003371 |
| Nearest Ensembl: | ENSG00000160293 |
| Gene Name: | VAV2 |
| Gene Alias: | VAV-2 |
| Gene Description: | vav guanine nucleotide exchange factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
