Difference between revisions of "TSS:Mm 50354.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Ap4= |
| + | |E430037F08Rik= | ||
| + | |Zfp-464= | ||
| + | |Zfp464= | ||
| + | |all_trans=MGI:1889817 | ||
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=330 | |distance_to_tss=330 | ||
|end=48594222 | |end=48594222 | ||
| + | |end_of_center_position=48594214 | ||
|entrez_id=58887 | |entrez_id=58887 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=AI425994 | + | |gene_alias=AI425994{{!}}Ap4{{!}}E430037F08Rik{{!}}Zfp-464{{!}}Zfp464 |
|gene_description=replication initiator 1 | |gene_description=replication initiator 1 | ||
|gene_id=58887 | |gene_id=58887 | ||
| Line 18: | Line 23: | ||
|hgnc_mgi_id=MGI:1889817 | |hgnc_mgi_id=MGI:1889817 | ||
|nearest_ensembl=ENSMUSG00000052751 | |nearest_ensembl=ENSMUSG00000052751 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_175099 |
|nearest_refseq=NM_175099 | |nearest_refseq=NM_175099 | ||
|nearest_unigene=Mm.219183 | |nearest_unigene=Mm.219183 | ||
| − | |num_trans= | + | |num_trans=58887 |
|species=mouse | |species=mouse | ||
|start=48594204 | |start=48594204 | ||
| + | |start_of_center_position=48594213 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000150030.1 | |transcript_name=ENSMUST00000150030.1 | ||
Latest revision as of 01:25, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 48594213 |
|---|---|
| End of the center position in the TSS region: | 48594214 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000150030.1 |
|---|---|
| Distance: | 97 |
| Num_trans: | 58887 |
| All_trans: | MGI:1889817 |
TATA-Box annotation
| Distance to TSS: | 330 |
|---|---|
| Nearest PromoterID: | NM_175099 |
| Entrez ID: | 58887 |
| Nearest Unigene: | Mm.219183 |
| Nearest Refseq: | NM_175099 |
| Nearest Ensembl: | ENSMUSG00000052751 |
| Gene Name: | replication initiator 1 |
| Gene Alias: | AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 |
| Gene Description: | replication initiator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
