Difference between revisions of "TSS:Mm 50817.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |OTTMUSG00000023151= |
| + | |all_trans=MGI:3044681 | ||
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=-51 | |distance=-51 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-27 |
|end=54429664 | |end=54429664 | ||
| − | |entrez_id= | + | |end_of_center_position=54429659 |
| + | |entrez_id=330319 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias= | + | |gene_alias=9030621G03{{!}}BQ952480 |
| − | |gene_description= | + | |gene_description=WAS/WASL interacting protein family, member 3 |
|gene_id=330319 | |gene_id=330319 | ||
| − | |gene_name= | + | |gene_name=WAS/WASL interacting protein family, member 3 |
|gene_source=MGI:3044681 | |gene_source=MGI:3044681 | ||
|gene_symbol=Wipf3 | |gene_symbol=Wipf3 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=MGI:3044681 | |hgnc_mgi_id=MGI:3044681 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000086040 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001167861 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001167860 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.434326 |
| − | |num_trans= | + | |num_trans=330319 |
|species=mouse | |species=mouse | ||
|start=54429653 | |start=54429653 | ||
| + | |start_of_center_position=54429658 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000132855.7 ENSMUST00000126637.7 | |transcript_name=ENSMUST00000132855.7 ENSMUST00000126637.7 | ||
Latest revision as of 01:35, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 54429658 |
|---|---|
| End of the center position in the TSS region: | 54429659 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000132855.7 ENSMUST00000126637.7 |
|---|---|
| Distance: | -51 |
| Num_trans: | 330319 |
| All_trans: | MGI:3044681 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001167861 |
| Entrez ID: | 330319 |
| Nearest Unigene: | Mm.434326 |
| Nearest Refseq: | NM_001167860 |
| Nearest Ensembl: | ENSMUSG00000086040 |
| Gene Name: | WAS/WASL interacting protein family, member 3 |
| Gene Alias: | 9030621G03|BQ952480 |
| Gene Description: | WAS/WASL interacting protein family, member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
