Difference between revisions of "TSS:Hg 103095.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |MRP-S2= | ||
| + | |S2mt= | ||
| + | |all_trans=HGNC:28435 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance_to_tss= | + | |distance=-471 |
| + | |distance_to_tss=559 | ||
| + | |end=135501263 | ||
| + | |end_of_center_position=135501242 | ||
|entrez_id=51116 | |entrez_id=51116 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=CGI-91 | + | |gene_alias=CGI-91{{!}}COXPD36{{!}}MRP-S2{{!}}S2mt |
|gene_description=mitochondrial ribosomal protein S2 | |gene_description=mitochondrial ribosomal protein S2 | ||
| − | |gene_name= | + | |gene_id=138162 |
| + | |gene_name=chromosome 9 open reading frame 116 | ||
| + | |gene_source=HGNC:28435 | ||
| + | |gene_symbol=C9orf116 | ||
| + | |gene_synonyms=MGC29761 PIERCE1 RbEST47 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28435 | ||
|nearest_ensembl=ENSG00000122140 | |nearest_ensembl=ENSG00000122140 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_051970 |
|nearest_refseq=NM_016034 | |nearest_refseq=NM_016034 | ||
|nearest_unigene=Hs.382044 | |nearest_unigene=Hs.382044 | ||
| + | |num_trans=138162 | ||
| + | |species=human | ||
| + | |start=135501219 | ||
| + | |start_of_center_position=135501241 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000371791.5 BC021261 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103095.1 | |tss_id=hg_103095.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5BN46 | ||
}} | }} | ||
Latest revision as of 18:41, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 135501241 |
|---|---|
| End of the center position in the TSS region: | 135501242 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371791.5 BC021261 |
|---|---|
| Distance: | -471 |
| Num_trans: | 138162 |
| All_trans: | HGNC:28435 |
TATA-Box annotation
| Distance to TSS: | 559 |
|---|---|
| Nearest PromoterID: | NR_051970 |
| Entrez ID: | 51116 |
| Nearest Unigene: | Hs.382044 |
| Nearest Refseq: | NM_016034 |
| Nearest Ensembl: | ENSG00000122140 |
| Gene Name: | chromosome 9 open reading frame 116 |
| Gene Alias: | CGI-91|COXPD36|MRP-S2|S2mt |
| Gene Description: | mitochondrial ribosomal protein S2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
