Difference between revisions of "TSS:Hg 103123.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:31009 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=-170 | |distance_to_tss=-170 | ||
| + | |end=136118613 | ||
| + | |end_of_center_position=136118602 | ||
|entrez_id=90120 | |entrez_id=90120 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias= | + | |gene_alias=C9orf69 |
| − | |gene_description= | + | |gene_description=transmembrane protein 250 |
| − | |gene_name= | + | |gene_id=90120 |
| + | |gene_name=transmembrane protein 250 | ||
| + | |gene_source=HGNC:31009 | ||
| + | |gene_symbol=TMEM250 | ||
| + | |gene_synonyms=bA83N9.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31009 | ||
|nearest_ensembl=ENSG00000238227 | |nearest_ensembl=ENSG00000238227 | ||
|nearest_promoter_id=NM_001256526 | |nearest_promoter_id=NM_001256526 | ||
|nearest_refseq=NM_152833 | |nearest_refseq=NM_152833 | ||
|nearest_unigene=Hs.287411 | |nearest_unigene=Hs.287411 | ||
| + | |num_trans=90120 | ||
| + | |species=human | ||
| + | |start=136118589 | ||
| + | |start_of_center_position=136118601 | ||
| + | |strand=- | ||
| + | |transcript_name=BC111053 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103123.1 | |tss_id=hg_103123.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:42, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 136118601 |
|---|---|
| End of the center position in the TSS region: | 136118602 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC111053 |
|---|---|
| Distance: | 0 |
| Num_trans: | 90120 |
| All_trans: | HGNC:31009 |
TATA-Box annotation
| Distance to TSS: | -170 |
|---|---|
| Nearest PromoterID: | NM_001256526 |
| Entrez ID: | 90120 |
| Nearest Unigene: | Hs.287411 |
| Nearest Refseq: | NM_152833 |
| Nearest Ensembl: | ENSG00000238227 |
| Gene Name: | transmembrane protein 250 |
| Gene Alias: | C9orf69 |
| Gene Description: | transmembrane protein 250 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
