Difference between revisions of "TSS:Hg 103135.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=19 |entrez_id=8022 |gc_percent=0.81592 |gene_alias=CPHD3|LIM3|M2-LHX3 |gene_description=LIM homeobox 3 |gene_name=LHX3 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LIM3= | ||
| + | |M2-LHX3= | ||
| + | |all_trans=HGNC:6595 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=35 | ||
| + | |end=136203166 | ||
| + | |end_of_center_position=136203155 | ||
|entrez_id=8022 | |entrez_id=8022 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=CPHD3 | + | |gene_alias=CPHD3{{!}}LIM3{{!}}M2-LHX3 |
|gene_description=LIM homeobox 3 | |gene_description=LIM homeobox 3 | ||
| − | |gene_name=LHX3 | + | |gene_id=8022 |
| + | |gene_name=LIM homeobox 3 | ||
| + | |gene_source=HGNC:6595 | ||
| + | |gene_symbol=LHX3 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6595 | ||
|nearest_ensembl=ENSG00000107187 | |nearest_ensembl=ENSG00000107187 | ||
|nearest_promoter_id=NM_014564 | |nearest_promoter_id=NM_014564 | ||
|nearest_refseq=NM_014564 | |nearest_refseq=NM_014564 | ||
|nearest_unigene=Hs.148427 | |nearest_unigene=Hs.148427 | ||
| + | |num_trans=8022 | ||
| + | |species=human | ||
| + | |start=136203142 | ||
| + | |start_of_center_position=136203154 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000645419.1 AB593065 AF156889 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103135.1 | |tss_id=hg_103135.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F1T0D8 | ||
}} | }} | ||
Latest revision as of 18:42, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136203154 |
|---|---|
| End of the center position in the TSS region: | 136203155 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000645419.1 AB593065 AF156889 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8022 |
| All_trans: | HGNC:6595 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_014564 |
| Entrez ID: | 8022 |
| Nearest Unigene: | Hs.148427 |
| Nearest Refseq: | NM_014564 |
| Nearest Ensembl: | ENSG00000107187 |
| Gene Name: | LIM homeobox 3 |
| Gene Alias: | CPHD3|LIM3|M2-LHX3 |
| Gene Description: | LIM homeobox 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
