Difference between revisions of "TSS:Hg 103180.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=24283 |entrez_id=101928483 |gc_percent=0.597015 |gene_alias=LINC01573|MIR4674HG|NALT |gene_description=NOTCH1 associated lncRNA...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MIR4674HG= | ||
| + | |NALT= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=NA | ||
|distance_to_tss=24283 | |distance_to_tss=24283 | ||
| + | |end=136572138 | ||
| + | |end_of_center_position=136572126 | ||
|entrez_id=101928483 | |entrez_id=101928483 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=LINC01573 | + | |gene_alias=LINC01573{{!}}MIR4674HG{{!}}NALT{{!}}TCONS_l2_00029132 |
| − | |gene_description=NOTCH1 associated lncRNA in T | + | |gene_description=NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 |
|gene_name=NALT1 | |gene_name=NALT1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NR_121577 | |nearest_refseq=NR_121577 | ||
|nearest_unigene=Hs.170035 | |nearest_unigene=Hs.170035 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=136572112 | ||
| + | |start_of_center_position=136572125 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103180.1 | |tss_id=hg_103180.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:40, 12 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136572125 |
|---|---|
| End of the center position in the TSS region: | 136572126 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 24283 |
|---|---|
| Nearest PromoterID: | NR_121577 |
| Entrez ID: | 101928483 |
| Nearest Unigene: | Hs.170035 |
| Nearest Refseq: | NR_121577 |
| Nearest Ensembl: | |
| Gene Name: | NALT1 |
| Gene Alias: | LINC01573|MIR4674HG|NALT|TCONS_l2_00029132 |
| Gene Description: | NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
