Difference between revisions of "TSS:Mm 61568.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK038478:0 AK015078:-1 ENSMUST00000197011.1:-7 ENSMUST00000035939.7:-95 uc009hys.1:-95 AK034273:-95 |chr=chr7 |cpg_percent=0.14 |distance=0 |distance_to...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3696417 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=3794 | |distance_to_tss=3794 | ||
|end=79710406 | |end=79710406 | ||
| + | |end_of_center_position=79710392 | ||
|entrez_id=16576 | |entrez_id=16576 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:3696417 | |hgnc_mgi_id=MGI:3696417 | ||
|nearest_ensembl=ENSMUSG00000050382 | |nearest_ensembl=ENSMUSG00000050382 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001291222 |
|nearest_refseq=NM_010626 | |nearest_refseq=NM_010626 | ||
|nearest_unigene=Mm.101633 | |nearest_unigene=Mm.101633 | ||
| − | |num_trans= | + | |num_trans=100034360 |
|species=mouse | |species=mouse | ||
|start=79710377 | |start=79710377 | ||
| + | |start_of_center_position=79710391 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK038478 | |transcript_name=AK038478 | ||
Latest revision as of 05:35, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 79710391 |
|---|---|
| End of the center position in the TSS region: | 79710392 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK038478 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100034360 |
| All_trans: | MGI:3696417 |
TATA-Box annotation
| Distance to TSS: | 3794 |
|---|---|
| Nearest PromoterID: | NM_001291222 |
| Entrez ID: | 16576 |
| Nearest Unigene: | Mm.101633 |
| Nearest Refseq: | NM_010626 |
| Nearest Ensembl: | ENSMUSG00000050382 |
| Gene Name: | RIKEN cDNA 9330171B17 gene |
| Gene Alias: | - |
| Gene Description: | kinesin family member 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
