Difference between revisions of "TSS:Hg 10320.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:7436 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=-107 | ||
|distance_to_tss=551 | |distance_to_tss=551 | ||
| + | |end=11803138 | ||
| + | |end_of_center_position=11803127 | ||
|entrez_id=4524 | |entrez_id=4524 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=methylenetetrahydrofolate reductase | |gene_description=methylenetetrahydrofolate reductase | ||
| − | |gene_name=MTHFR | + | |gene_id=4524 |
| + | |gene_name=methylenetetrahydrofolate reductase | ||
| + | |gene_source=HGNC:7436 | ||
| + | |gene_symbol=MTHFR | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7436 | ||
|nearest_ensembl=ENSG00000177000 | |nearest_ensembl=ENSG00000177000 | ||
|nearest_promoter_id=NM_001330358 | |nearest_promoter_id=NM_001330358 | ||
|nearest_refseq=NM_005957 | |nearest_refseq=NM_005957 | ||
|nearest_unigene=Hs.214142 | |nearest_unigene=Hs.214142 | ||
| + | |num_trans=4524 | ||
| + | |species=human | ||
| + | |start=11803114 | ||
| + | |start_of_center_position=11803126 | ||
| + | |strand=- | ||
| + | |transcript_name=AJ237672 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10320.1 | |tss_id=hg_10320.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:43, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11803126 |
|---|---|
| End of the center position in the TSS region: | 11803127 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AJ237672 |
|---|---|
| Distance: | -107 |
| Num_trans: | 4524 |
| All_trans: | HGNC:7436 |
TATA-Box annotation
| Distance to TSS: | 551 |
|---|---|
| Nearest PromoterID: | NM_001330358 |
| Entrez ID: | 4524 |
| Nearest Unigene: | Hs.214142 |
| Nearest Refseq: | NM_005957 |
| Nearest Ensembl: | ENSG00000177000 |
| Gene Name: | methylenetetrahydrofolate reductase |
| Gene Alias: | - |
| Gene Description: | methylenetetrahydrofolate reductase |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
