Difference between revisions of "TSS:Hg 103214.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |LCN5= | ||
| + | |all_trans=HGNC:27038 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-1 | ||
|distance_to_tss=4 | |distance_to_tss=4 | ||
| + | |end=136758278 | ||
| + | |end_of_center_position=136758275 | ||
|entrez_id=138307 | |entrez_id=138307 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=EP17 | + | |gene_alias=EP17{{!}}LCN5 |
|gene_description=lipocalin 8 | |gene_description=lipocalin 8 | ||
| − | |gene_name=LCN8 | + | |gene_id=138307 |
| + | |gene_name=lipocalin 8 | ||
| + | |gene_source=HGNC:27038 | ||
| + | |gene_symbol=LCN8 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:27038 | ||
|nearest_ensembl=ENSG00000204001 | |nearest_ensembl=ENSG00000204001 | ||
|nearest_promoter_id=NM_178469 | |nearest_promoter_id=NM_178469 | ||
|nearest_refseq=NM_178469 | |nearest_refseq=NM_178469 | ||
|nearest_unigene=Hs.323991 | |nearest_unigene=Hs.323991 | ||
| + | |num_trans=138307 | ||
| + | |species=human | ||
| + | |start=136758271 | ||
| + | |start_of_center_position=136758274 | ||
| + | |strand=- | ||
| + | |transcript_name=AK126902 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103214.1 | |tss_id=hg_103214.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6ZT51 | ||
}} | }} | ||
Latest revision as of 18:44, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136758274 |
|---|---|
| End of the center position in the TSS region: | 136758275 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK126902 |
|---|---|
| Distance: | -1 |
| Num_trans: | 138307 |
| All_trans: | HGNC:27038 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17|LCN5 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
