Difference between revisions of "TSS:Mm 6402.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC039192:209 | + | |AW208790= |
| + | |IGFBP-5= | ||
| + | |IGFBP-5P= | ||
| + | |all_trans=LF216480:127 MA452057:127 BC039192:209 LF216479:302 MA452056:302 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=127 |
|distance_to_tss=12564 | |distance_to_tss=12564 | ||
|end=72862306 | |end=72862306 | ||
| + | |end_of_center_position=72862301 | ||
|entrez_id=16011 | |entrez_id=16011 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=AI256729 | + | |gene_alias=AI256729{{!}}AW208790{{!}}IGFBP-5{{!}}IGFBP-5P |
|gene_description=insulin-like growth factor binding protein 5 | |gene_description=insulin-like growth factor binding protein 5 | ||
|gene_id=16011 | |gene_id=16011 | ||
| − | |gene_name= | + | |gene_name=Igfbp5 |
|gene_source=MGI:96440 | |gene_source=MGI:96440 | ||
|gene_symbol=Igfbp5 | |gene_symbol=Igfbp5 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_010518 | |nearest_refseq=NM_010518 | ||
|nearest_unigene=Mm.405761 | |nearest_unigene=Mm.405761 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=72862295 | |start=72862295 | ||
| + | |start_of_center_position=72862300 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF216480 MA452057 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_6402.1 | |tss_id=mm_6402.1 | ||
Latest revision as of 14:30, 21 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 72862300 |
|---|---|
| End of the center position in the TSS region: | 72862301 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF216480 MA452057 |
|---|---|
| Distance: | 127 |
| Num_trans: | 5 |
| All_trans: | LF216480:127 MA452057:127 BC039192:209 LF216479:302 MA452056:302 |
TATA-Box annotation
| Distance to TSS: | 12564 |
|---|---|
| Nearest PromoterID: | NM_010518 |
| Entrez ID: | 16011 |
| Nearest Unigene: | Mm.405761 |
| Nearest Refseq: | NM_010518 |
| Nearest Ensembl: | ENSMUSG00000026185 |
| Gene Name: | Igfbp5 |
| Gene Alias: | AI256729|AW208790|IGFBP-5|IGFBP-5P |
| Gene Description: | insulin-like growth factor binding protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
