Difference between revisions of "TSS:Hg 103232.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |EDF-1= | ||
| + | |MBF1= | ||
| + | |all_trans=HGNC:3164 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=25 | ||
| + | |end=136866288 | ||
| + | |end_of_center_position=136866283 | ||
|entrez_id=8721 | |entrez_id=8721 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=CFAP280 | + | |gene_alias=CFAP280{{!}}EDF-1{{!}}MBF1 |
|gene_description=endothelial differentiation related factor 1 | |gene_description=endothelial differentiation related factor 1 | ||
| − | |gene_name=EDF1 | + | |gene_id=8721 |
| + | |gene_name=endothelial differentiation related factor 1 | ||
| + | |gene_source=HGNC:3164 | ||
| + | |gene_symbol=EDF1 | ||
| + | |gene_synonyms=CFAP280 EDF-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3164 | ||
|nearest_ensembl=ENSG00000107223 | |nearest_ensembl=ENSG00000107223 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001281298 |
|nearest_refseq=NM_003792 | |nearest_refseq=NM_003792 | ||
|nearest_unigene=Hs.174050 | |nearest_unigene=Hs.174050 | ||
| + | |num_trans=8721 | ||
| + | |species=human | ||
| + | |start=136866277 | ||
| + | |start_of_center_position=136866282 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000371649.5 BC015500 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103232.1 | |tss_id=hg_103232.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O60869 | ||
}} | }} | ||
Latest revision as of 18:44, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 136866282 |
|---|---|
| End of the center position in the TSS region: | 136866283 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371649.5 BC015500 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8721 |
| All_trans: | HGNC:3164 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_001281298 |
| Entrez ID: | 8721 |
| Nearest Unigene: | Hs.174050 |
| Nearest Refseq: | NM_003792 |
| Nearest Ensembl: | ENSG00000107223 |
| Gene Name: | endothelial differentiation related factor 1 |
| Gene Alias: | CFAP280|EDF-1|MBF1 |
| Gene Description: | endothelial differentiation related factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
