Difference between revisions of "TSS:Hg 103259.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:2064 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=-109 |
| + | |distance_to_tss=150 | ||
| + | |end=136996424 | ||
| + | |end_of_center_position=136996419 | ||
|entrez_id=9022 | |entrez_id=9022 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chloride intracellular channel 3 | |gene_description=chloride intracellular channel 3 | ||
| − | |gene_name=CLIC3 | + | |gene_id=9022 |
| + | |gene_name=chloride intracellular channel 3 | ||
| + | |gene_source=HGNC:2064 | ||
| + | |gene_symbol=CLIC3 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2064 | ||
|nearest_ensembl=ENSG00000169583 | |nearest_ensembl=ENSG00000169583 | ||
|nearest_promoter_id=NM_004669 | |nearest_promoter_id=NM_004669 | ||
|nearest_refseq=NM_004669 | |nearest_refseq=NM_004669 | ||
|nearest_unigene=Hs.64746 | |nearest_unigene=Hs.64746 | ||
| − | |tata_box= | + | |num_trans=9022 |
| + | |species=human | ||
| + | |start=136996412 | ||
| + | |start_of_center_position=136996418 | ||
| + | |strand=- | ||
| + | |tata_box=-48(GCTTTTCTGGGC,+,0.00) | ||
| + | |transcript_name=AF102166 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103259.1 | |tss_id=hg_103259.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:45, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136996418 |
|---|---|
| End of the center position in the TSS region: | 136996419 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF102166 |
|---|---|
| Distance: | -109 |
| Num_trans: | 9022 |
| All_trans: | HGNC:2064 |
TATA-Box annotation
| Distance to TSS: | 150 |
|---|---|
| Nearest PromoterID: | NM_004669 |
| Entrez ID: | 9022 |
| Nearest Unigene: | Hs.64746 |
| Nearest Refseq: | NM_004669 |
| Nearest Ensembl: | ENSG00000169583 |
| Gene Name: | chloride intracellular channel 3 |
| Gene Alias: | - |
| Gene Description: | chloride intracellular channel 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -48(GCTTTTCTGGGC,+,0.00) |
