Difference between revisions of "TSS:Mm 67947.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000184420.1:28 AK143876:28 |chr=chr7 |cpg_percent=0.02 |distance=28 |distance_to_tss=-5760 |end=100467244 |entrez_id=22229 |gc_percent=0.497512...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Slc25a9= |
| + | |UCP-3= | ||
| + | |all_trans=MGI:3642592 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-5760 | |distance_to_tss=-5760 | ||
|end=100467244 | |end=100467244 | ||
| + | |end_of_center_position=100467231 | ||
|entrez_id=22229 | |entrez_id=22229 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=AI645527 | + | |gene_alias=AI645527{{!}}Slc25a9{{!}}UCP-3 |
| − | |gene_description= | + | |gene_description=uncoupling protein 3 (mitochondrial, proton carrier) |
|gene_id=100038497 | |gene_id=100038497 | ||
|gene_name=predicted gene 10603 | |gene_name=predicted gene 10603 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_009464 | |nearest_refseq=NM_009464 | ||
|nearest_unigene=Mm.6254 | |nearest_unigene=Mm.6254 | ||
| − | |num_trans= | + | |num_trans=100038497 |
|species=mouse | |species=mouse | ||
|start=100467217 | |start=100467217 | ||
| + | |start_of_center_position=100467230 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-63(GACTTTAAAGGG,-,0.00),-62(ACTTTAAAGGGG,+,0.00) |
|transcript_name=ENSMUST00000184420.1 AK143876 | |transcript_name=ENSMUST00000184420.1 AK143876 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 07:58, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 100467230 |
|---|---|
| End of the center position in the TSS region: | 100467231 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000184420.1 AK143876 |
|---|---|
| Distance: | 28 |
| Num_trans: | 100038497 |
| All_trans: | MGI:3642592 |
TATA-Box annotation
| Distance to TSS: | -5760 |
|---|---|
| Nearest PromoterID: | NM_009464 |
| Entrez ID: | 22229 |
| Nearest Unigene: | Mm.6254 |
| Nearest Refseq: | NM_009464 |
| Nearest Ensembl: | ENSMUSG00000032942 |
| Gene Name: | predicted gene 10603 |
| Gene Alias: | AI645527|Slc25a9|UCP-3 |
| Gene Description: | uncoupling protein 3 (mitochondrial, proton carrier) |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -63(GACTTTAAAGGG,-,0.00),-62(ACTTTAAAGGGG,+,0.00) |
