Difference between revisions of "TSS:Mm 78341.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK196493:0 |chr=chr9 |cpg_percent=0.005 |distance=0 |distance_to_tss=41283 |end=25293767 |entrez_id=235072 |gc_percent=0.323383 |gene_alias=Cdc10|E43003...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |E430034N22= |
| + | |all_trans=MGI:1335094 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=40830 |
|end=25293767 | |end=25293767 | ||
| + | |end_of_center_position=25293722 | ||
|entrez_id=235072 | |entrez_id=235072 | ||
|gc_percent=0.323383 | |gc_percent=0.323383 | ||
| − | |gene_alias=Cdc10 | + | |gene_alias=Cdc10{{!}}E430034N22 |
|gene_description=septin 7 | |gene_description=septin 7 | ||
|gene_id=235072 | |gene_id=235072 | ||
|gene_name=septin 7 | |gene_name=septin 7 | ||
|gene_source=MGI:1335094 | |gene_source=MGI:1335094 | ||
| − | |gene_symbol= | + | |gene_symbol=Septin7 |
| − | |gene_synonyms=Cdc10 | + | |gene_synonyms=Cdc10 Sept7 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1335094 | |hgnc_mgi_id=MGI:1335094 | ||
|nearest_ensembl=ENSMUSG00000001833 | |nearest_ensembl=ENSMUSG00000001833 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359738 |
|nearest_refseq=NM_009859 | |nearest_refseq=NM_009859 | ||
|nearest_unigene=Mm.270259 | |nearest_unigene=Mm.270259 | ||
| − | |num_trans= | + | |num_trans=235072 |
|species=mouse | |species=mouse | ||
|start=25293676 | |start=25293676 | ||
| + | |start_of_center_position=25293721 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=66(CAGTTTAAAAAG,-,0.00) |
|transcript_name=AK196493 | |transcript_name=AK196493 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 11:44, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 25293721 |
|---|---|
| End of the center position in the TSS region: | 25293722 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK196493 |
|---|---|
| Distance: | 0 |
| Num_trans: | 235072 |
| All_trans: | MGI:1335094 |
TATA-Box annotation
| Distance to TSS: | 40830 |
|---|---|
| Nearest PromoterID: | NM_001359738 |
| Entrez ID: | 235072 |
| Nearest Unigene: | Mm.270259 |
| Nearest Refseq: | NM_009859 |
| Nearest Ensembl: | ENSMUSG00000001833 |
| Gene Name: | septin 7 |
| Gene Alias: | Cdc10|E430034N22 |
| Gene Description: | septin 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.323383 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 66(CAGTTTAAAAAG,-,0.00) |
