Difference between revisions of "TSS:Hg 103444.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-167020 |entrez_id=642394 |gc_percent=0.517413 |gene_alias=C10orf109|NCRNA00168|bA466B20.1 |gene_description=ADARB2 antisense RN...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00168= | ||
| + | |bA466B20.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=NA | ||
|distance_to_tss=-167020 | |distance_to_tss=-167020 | ||
| + | |end=1359612 | ||
| + | |end_of_center_position=1359610 | ||
|entrez_id=642394 | |entrez_id=642394 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=C10orf109 | + | |gene_alias=C10orf109{{!}}NCRNA00168 |
|gene_description=ADARB2 antisense RNA 1 | |gene_description=ADARB2 antisense RNA 1 | ||
|gene_name=ADARB2-AS1 | |gene_name=ADARB2-AS1 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_001098830 | |nearest_refseq=NM_001098830 | ||
|nearest_unigene=Hs.568831 | |nearest_unigene=Hs.568831 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=1359607 | ||
| + | |start_of_center_position=1359609 | ||
| + | |strand=+ | ||
| + | |tata_box=-33(GTGTTTATAAGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103444.1 | |tss_id=hg_103444.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1359609 |
|---|---|
| End of the center position in the TSS region: | 1359610 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -167020 |
|---|---|
| Nearest PromoterID: | NR_033387 |
| Entrez ID: | 642394 |
| Nearest Unigene: | Hs.568831 |
| Nearest Refseq: | NM_001098830 |
| Nearest Ensembl: | ENSG00000205696 |
| Gene Name: | ADARB2-AS1 |
| Gene Alias: | C10orf109|NCRNA00168 |
| Gene Description: | ADARB2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GTGTTTATAAGG,-,0.00) |
