Difference between revisions of "TSS:Mm 86677.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000181897.1:0 AK133237:0 |chr=chr10 |cpg_percent=0.075 |distance=0 |distance_to_tss=-61 |end=18235054 |entrez_id=215814 |gc_percent=0.616915 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI480677= |
| + | |all_trans=MGI:3642321 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-61 | |distance_to_tss=-61 | ||
|end=18235054 | |end=18235054 | ||
| + | |end_of_center_position=18235043 | ||
|entrez_id=215814 | |entrez_id=215814 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=1700009P13Rik | + | |gene_alias=1700009P13Rik{{!}}AI480677 |
|gene_description=coiled-coil domain containing 28A | |gene_description=coiled-coil domain containing 28A | ||
|gene_id=100038405 | |gene_id=100038405 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_144820 | |nearest_refseq=NM_144820 | ||
|nearest_unigene=Mm.296565 | |nearest_unigene=Mm.296565 | ||
| − | |num_trans= | + | |num_trans=100038405 |
|species=mouse | |species=mouse | ||
|start=18235030 | |start=18235030 | ||
| + | |start_of_center_position=18235042 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000181897.1 AK133237 | |transcript_name=ENSMUST00000181897.1 AK133237 | ||
Latest revision as of 14:47, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 18235042 |
|---|---|
| End of the center position in the TSS region: | 18235043 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000181897.1 AK133237 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100038405 |
| All_trans: | MGI:3642321 |
TATA-Box annotation
| Distance to TSS: | -61 |
|---|---|
| Nearest PromoterID: | NM_144820 |
| Entrez ID: | 215814 |
| Nearest Unigene: | Mm.296565 |
| Nearest Refseq: | NM_144820 |
| Nearest Ensembl: | ENSMUSG00000059554 |
| Gene Name: | predicted gene 10827 |
| Gene Alias: | 1700009P13Rik|AI480677 |
| Gene Description: | coiled-coil domain containing 28A |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
