Difference between revisions of "TSS:Mm 88408.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000099552.2:0 NR_045882:0 uc007fvb.1:0 AK143813:0 |chr=chr10 |cpg_percent=0.01 |distance=0 |distance_to_tss=0 |end=77012005 |entrez_id=10003847...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3642150 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
|end=77012005 | |end=77012005 | ||
| + | |end_of_center_position=77011995 | ||
|entrez_id=100038479 | |entrez_id=100038479 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 10787 | |gene_description=predicted gene 10787 | ||
|gene_id=100038479 | |gene_id=100038479 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_045882 | |nearest_refseq=NR_045882 | ||
|nearest_unigene=Mm.387034 | |nearest_unigene=Mm.387034 | ||
| − | |num_trans= | + | |num_trans=100038479 |
|species=mouse | |species=mouse | ||
|start=77011984 | |start=77011984 | ||
| + | |start_of_center_position=77011994 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000099552.2 | + | |transcript_name=ENSMUST00000099552.2 AK143813 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_88408.1 | |tss_id=mm_88408.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q3UP50 |
}} | }} | ||
Latest revision as of 15:24, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 77011994 |
|---|---|
| End of the center position in the TSS region: | 77011995 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000099552.2 AK143813 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100038479 |
| All_trans: | MGI:3642150 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NR_045882 |
| Entrez ID: | 100038479 |
| Nearest Unigene: | Mm.387034 |
| Nearest Refseq: | NR_045882 |
| Nearest Ensembl: | ENSMUSG00000074919 |
| Gene Name: | predicted gene 10787 |
| Gene Alias: | - |
| Gene Description: | predicted gene 10787 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
