Difference between revisions of "TSS:Mm 88488.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001081452:23 uc011xhj.2:23 ENSMUST00000075421.6:34 |chr=chr10 |cpg_percent=0 |distance=23 |distance_to_tss=-26 |end=77711423 |entrez_id=100009614 |gc...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001081452 | + | |all_trans=NM_001081452:23 ENSMUST00000075421.6:34 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-26 | |distance_to_tss=-26 | ||
|end=77711423 | |end=77711423 | ||
| + | |end_of_center_position=77711421 | ||
|entrez_id=100009614 | |entrez_id=100009614 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 10024 | |gene_description=predicted gene 10024 | ||
|gene_id=100009614 | |gene_id=100009614 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001081452 | |nearest_refseq=NM_001081452 | ||
|nearest_unigene=Mm.35821 | |nearest_unigene=Mm.35821 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=77711417 | |start=77711417 | ||
| + | |start_of_center_position=77711420 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-33(GGGTATAAAAGC,-,0.00) |
| − | |transcript_name=NM_001081452 | + | |transcript_name=NM_001081452.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_88488.1 | |tss_id=mm_88488.1 | ||
Latest revision as of 15:26, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 77711420 |
|---|---|
| End of the center position in the TSS region: | 77711421 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001081452.2 |
|---|---|
| Distance: | 23 |
| Num_trans: | 2 |
| All_trans: | NM_001081452:23 ENSMUST00000075421.6:34 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NM_001081452 |
| Entrez ID: | 100009614 |
| Nearest Unigene: | Mm.35821 |
| Nearest Refseq: | NM_001081452 |
| Nearest Ensembl: | ENSMUSG00000094012 |
| Gene Name: | predicted gene 10024 |
| Gene Alias: | - |
| Gene Description: | predicted gene 10024 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GGGTATAAAAGC,-,0.00) |
