Difference between revisions of "TSS:Mm 89081.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK145000:0 AK166233:0 AK043911:0 AK038582:0 ENSMUST00000038388.5:-1 NM_001033375:-1 uc007gkj.1:-1 uc011xkp.1:-1 BC145215:-190 |chr=chr10 |cpg_percent=0....") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AA589518= |
| + | |Kiaa1033= | ||
| + | |all_trans=MGI:2441787 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=33 | |distance_to_tss=33 | ||
|end=83544007 | |end=83544007 | ||
| + | |end_of_center_position=83543975 | ||
|entrez_id=319277 | |entrez_id=319277 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=A230046K03Rik | + | |gene_alias=A230046K03Rik{{!}}AA589518{{!}}Kiaa1033{{!}}mKIAA1033 |
|gene_description=WASH complex subunit 4 | |gene_description=WASH complex subunit 4 | ||
|gene_id=319277 | |gene_id=319277 | ||
| − | |gene_name= | + | |gene_name=WASH complex subunit 4 |
|gene_source=MGI:2441787 | |gene_source=MGI:2441787 | ||
| − | |gene_symbol= | + | |gene_symbol=Washc4 |
| − | |gene_synonyms= | + | |gene_synonyms=A230046K03Rik |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2441787 | |hgnc_mgi_id=MGI:2441787 | ||
| + | |mKIAA1033= | ||
|nearest_ensembl=ENSMUSG00000034560 | |nearest_ensembl=ENSMUSG00000034560 | ||
|nearest_promoter_id=NM_001033375 | |nearest_promoter_id=NM_001033375 | ||
|nearest_refseq=NM_001033375 | |nearest_refseq=NM_001033375 | ||
|nearest_unigene=Mm.491194 | |nearest_unigene=Mm.491194 | ||
| − | |num_trans= | + | |num_trans=319277 |
|species=mouse | |species=mouse | ||
|start=83543941 | |start=83543941 | ||
| + | |start_of_center_position=83543974 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK145000 AK166233 AK043911 AK038582 | |transcript_name=AK145000 AK166233 AK043911 AK038582 | ||
Latest revision as of 15:40, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 83543974 |
|---|---|
| End of the center position in the TSS region: | 83543975 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK145000 AK166233 AK043911 AK038582 |
|---|---|
| Distance: | 0 |
| Num_trans: | 319277 |
| All_trans: | MGI:2441787 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_001033375 |
| Entrez ID: | 319277 |
| Nearest Unigene: | Mm.491194 |
| Nearest Refseq: | NM_001033375 |
| Nearest Ensembl: | ENSMUSG00000034560 |
| Gene Name: | WASH complex subunit 4 |
| Gene Alias: | A230046K03Rik|AA589518|Kiaa1033|mKIAA1033 |
| Gene Description: | WASH complex subunit 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
