Difference between revisions of "TSS:Hg 100151.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |FAM29A= | ||
| + | |all_trans=HGNC:25948 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance_to_tss=- | + | |distance=0 |
| + | |distance_to_tss=-200 | ||
| + | |end=19103120 | ||
| + | |end_of_center_position=19103105 | ||
|entrez_id=54801 | |entrez_id=54801 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=Dgt6 | + | |gene_alias=Dgt6{{!}}FAM29A |
|gene_description=HAUS augmin like complex subunit 6 | |gene_description=HAUS augmin like complex subunit 6 | ||
| − | |gene_name=HAUS6 | + | |gene_id=54801 |
| + | |gene_name=HAUS augmin like complex subunit 6 | ||
| + | |gene_source=HGNC:25948 | ||
| + | |gene_symbol=HAUS6 | ||
| + | |gene_synonyms=FLJ20060 KIAA1574 dgt6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25948 | ||
|nearest_ensembl=ENSG00000147874 | |nearest_ensembl=ENSG00000147874 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_017645 |
|nearest_refseq=NM_017645 | |nearest_refseq=NM_017645 | ||
|nearest_unigene=Hs.533468 | |nearest_unigene=Hs.533468 | ||
| − | |tata_box= | + | |num_trans=54801 |
| + | |species=human | ||
| + | |start=19103088 | ||
| + | |start_of_center_position=19103104 | ||
| + | |strand=- | ||
| + | |tata_box=-84(CCATTTATGGCT,+,0.00) | ||
| + | |transcript_name=AF533709 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100151.1 | |tss_id=hg_100151.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:37, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19103104 |
|---|---|
| End of the center position in the TSS region: | 19103105 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF533709 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54801 |
| All_trans: | HGNC:25948 |
TATA-Box annotation
| Distance to TSS: | -200 |
|---|---|
| Nearest PromoterID: | NM_017645 |
| Entrez ID: | 54801 |
| Nearest Unigene: | Hs.533468 |
| Nearest Refseq: | NM_017645 |
| Nearest Ensembl: | ENSG00000147874 |
| Gene Name: | HAUS augmin like complex subunit 6 |
| Gene Alias: | Dgt6|FAM29A |
| Gene Description: | HAUS augmin like complex subunit 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -84(CCATTTATGGCT,+,0.00) |
