Difference between revisions of "TSS:Mm 992.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans= | + | |A430105C05Rik= |
+ | |CLARP= | ||
+ | |Cash= | ||
+ | |Casper= | ||
+ | |ENSMUSG00000072980= | ||
+ | |FLAME= | ||
+ | |FLAME-1= | ||
+ | |Flip= | ||
+ | |Gm9845= | ||
+ | |I-FLICE= | ||
+ | |MRIT= | ||
+ | |all_trans=MGI:1336166 | ||
+ | |c-Flip= | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
Line 6: | Line 18: | ||
|distance_to_tss=15 | |distance_to_tss=15 | ||
|end=58711523 | |end=58711523 | ||
+ | |end_of_center_position=58711506 | ||
|entrez_id=12633 | |entrez_id=12633 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
− | |gene_alias=2310024N18Rik | + | |gene_alias=2310024N18Rik{{!}}A430105C05Rik{{!}}CLARP{{!}}Cash{{!}}Casper{{!}}FLAME{{!}}FLAME-1{{!}}Flip{{!}}Gm9845{{!}}I-FLICE{{!}}MRIT{{!}}c-Flip |
|gene_description=CASP8 and FADD-like apoptosis regulator | |gene_description=CASP8 and FADD-like apoptosis regulator | ||
|gene_id=12633 | |gene_id=12633 | ||
Line 18: | Line 31: | ||
|hgnc_mgi_id=MGI:1336166 | |hgnc_mgi_id=MGI:1336166 | ||
|nearest_ensembl=ENSMUSG00000026031 | |nearest_ensembl=ENSMUSG00000026031 | ||
− | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001289704 |
|nearest_refseq=NM_009805 | |nearest_refseq=NM_009805 | ||
|nearest_unigene=Mm.336848 | |nearest_unigene=Mm.336848 | ||
− | |num_trans= | + | |num_trans=12633 |
|species=mouse | |species=mouse | ||
|start=58711488 | |start=58711488 | ||
+ | |start_of_center_position=58711505 | ||
|strand=+ | |strand=+ | ||
− | |transcript_name=ENSMUST00000149874.7 ENSMUST00000140940.7 ENSMUST00000164900.7 ENSMUST00000156870.1 | + | |transcript_name=ENSMUST00000149874.7 ENSMUST00000140940.7 ENSMUST00000164900.7 ENSMUST00000156870.1 AK009498 AK152515 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_992.1 | |tss_id=mm_992.1 |
Latest revision as of 19:20, 28 July 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 58711505 |
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End of the center position in the TSS region: | 58711506 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENSMUST00000149874.7 ENSMUST00000140940.7 ENSMUST00000164900.7 ENSMUST00000156870.1 AK009498 AK152515 |
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Distance: | 0 |
Num_trans: | 12633 |
All_trans: | MGI:1336166 |
TATA-Box annotation
Distance to TSS: | 15 |
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Nearest PromoterID: | NM_001289704 |
Entrez ID: | 12633 |
Nearest Unigene: | Mm.336848 |
Nearest Refseq: | NM_009805 |
Nearest Ensembl: | ENSMUSG00000026031 |
Gene Name: | CASP8 and FADD-like apoptosis regulator |
Gene Alias: | 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip |
Gene Description: | CASP8 and FADD-like apoptosis regulator |
Gene Type: | protein-coding |
CpG%: | 0.075 |
GC%: | 0.60199 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |