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Difference between revisions of "TSS:Mm 992.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000149874.7:0 ENSMUST00000140940.7:0 ENSMUST00000164900.7:0 ENSMUST00000156870.1:0 NM_001293804:0 NM_001289704:0 uc007bcn.3:0 uc007bco.3:0 AK00...")
 
 
(2 intermediate revisions by the same user not shown)
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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000149874.7:0 ENSMUST00000140940.7:0 ENSMUST00000164900.7:0 ENSMUST00000156870.1:0 NM_001293804:0 NM_001289704:0 uc007bcn.3:0 uc007bco.3:0 AK009498:0 AK152515:0 ENSMUST00000124567.1:11 ENSMUST00000097723.2:21 ENSMUST00000097722.8:28 ENSMUST00000114313.7:37 U97076:37
+
|A430105C05Rik=
 +
|CLARP=
 +
|Cash=
 +
|Casper=
 +
|ENSMUSG00000072980=
 +
|FLAME=
 +
|FLAME-1=
 +
|Flip=
 +
|Gm9845=
 +
|I-FLICE=
 +
|MRIT=
 +
|all_trans=MGI:1336166
 +
|c-Flip=
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 6: Line 18:
 
|distance_to_tss=15
 
|distance_to_tss=15
 
|end=58711523
 
|end=58711523
 +
|end_of_center_position=58711506
 
|entrez_id=12633
 
|entrez_id=12633
 
|gc_percent=0.60199
 
|gc_percent=0.60199
|gene_alias=2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip
+
|gene_alias=2310024N18Rik{{!}}A430105C05Rik{{!}}CLARP{{!}}Cash{{!}}Casper{{!}}FLAME{{!}}FLAME-1{{!}}Flip{{!}}Gm9845{{!}}I-FLICE{{!}}MRIT{{!}}c-Flip
 
|gene_description=CASP8 and FADD-like apoptosis regulator
 
|gene_description=CASP8 and FADD-like apoptosis regulator
 
|gene_id=12633
 
|gene_id=12633
Line 18: Line 31:
 
|hgnc_mgi_id=MGI:1336166
 
|hgnc_mgi_id=MGI:1336166
 
|nearest_ensembl=ENSMUSG00000026031
 
|nearest_ensembl=ENSMUSG00000026031
|nearest_promoter_id=NM_001293804
+
|nearest_promoter_id=NM_001289704
 
|nearest_refseq=NM_009805
 
|nearest_refseq=NM_009805
 
|nearest_unigene=Mm.336848
 
|nearest_unigene=Mm.336848
|num_trans=15
+
|num_trans=12633
 
|species=mouse
 
|species=mouse
 
|start=58711488
 
|start=58711488
 +
|start_of_center_position=58711505
 
|strand=+
 
|strand=+
|transcript_name=ENSMUST00000149874.7 ENSMUST00000140940.7 ENSMUST00000164900.7 ENSMUST00000156870.1 NM_001293804 NM_001289704 uc007bcn.3 uc007bco.3 AK009498 AK152515
+
|transcript_name=ENSMUST00000149874.7 ENSMUST00000140940.7 ENSMUST00000164900.7 ENSMUST00000156870.1 AK009498 AK152515
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_992.1
 
|tss_id=mm_992.1

Latest revision as of 19:20, 28 July 2021

Basic information about the TSS


TSS ID:mm_992.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:58711488
End:58711523
Strand:+
TSS Score:1
Start of the center position in the TSS region:58711505
End of the center position in the TSS region:58711506



Gene and protein annotation


Transcript_name:ENSMUST00000149874.7 ENSMUST00000140940.7 ENSMUST00000164900.7 ENSMUST00000156870.1 AK009498 AK152515
Distance:0
GeneID:12633
HGNC/MGI_ID:MGI:1336166
UniProt_ID:Q812G4
Gene_name:CASP8 and FADD-like apoptosis regulator
Gene_symbol:Cflar
Gene_synonyms:2310024N18Rik A430105C05Rik Cash Casper Flip c-Flip
Gene_source:MGI:1336166



Transcript annotation


Transcript_name:ENSMUST00000149874.7 ENSMUST00000140940.7 ENSMUST00000164900.7 ENSMUST00000156870.1 AK009498 AK152515
Distance:0
Num_trans:12633
All_trans:MGI:1336166



TATA-Box annotation


Distance to TSS:15
Nearest PromoterID:NM_001289704
Entrez ID:12633
Nearest Unigene:Mm.336848
Nearest Refseq:NM_009805
Nearest Ensembl:ENSMUSG00000026031
Gene Name:CASP8 and FADD-like apoptosis regulator
Gene Alias:2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip
Gene Description:CASP8 and FADD-like apoptosis regulator
Gene Type:protein-coding
CpG%:0.075
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):