Difference between revisions of "TSS:Mm 99275.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Pha2b= |
| + | |Prkwnk4= | ||
| + | |all_trans=MGI:1917097 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
|end=101260560 | |end=101260560 | ||
| + | |end_of_center_position=101260555 | ||
|entrez_id=69847 | |entrez_id=69847 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=2010002J11Rik | + | |gene_alias=2010002J11Rik{{!}}Pha2b{{!}}Prkwnk4 |
|gene_description=WNK lysine deficient protein kinase 4 | |gene_description=WNK lysine deficient protein kinase 4 | ||
|gene_id=69847 | |gene_id=69847 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_175638 | |nearest_refseq=NM_175638 | ||
|nearest_unigene=Mm.23656 | |nearest_unigene=Mm.23656 | ||
| − | |num_trans= | + | |num_trans=69847 |
|species=mouse | |species=mouse | ||
|start=101260549 | |start=101260549 | ||
| + | |start_of_center_position=101260554 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000139487.7 | + | |transcript_name=ENSMUST00000139487.7 BC037114 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99275.1 | |tss_id=mm_99275.1 | ||
Latest revision as of 19:22, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101260554 |
|---|---|
| End of the center position in the TSS region: | 101260555 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000139487.7 BC037114 |
|---|---|
| Distance: | 7 |
| Num_trans: | 69847 |
| All_trans: | MGI:1917097 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_175638 |
| Entrez ID: | 69847 |
| Nearest Unigene: | Mm.23656 |
| Nearest Refseq: | NM_175638 |
| Nearest Ensembl: | ENSMUSG00000035112 |
| Gene Name: | WNK lysine deficient protein kinase 4 |
| Gene Alias: | 2010002J11Rik|Pha2b|Prkwnk4 |
| Gene Description: | WNK lysine deficient protein kinase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
