Difference between revisions of "TSS:Mm 99280.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC006866:-14 NM_026562:15 uc007loi.1:15 AK007245:15 ENSMUST00000103107.4:-62 AK049116:-62 ENSMUST00000128735.1:-146 uc007loh.1:-146 AK006754:-146 |chr=c...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |4921513J16Rik= |
| + | |5430417M23Rik= | ||
| + | |Cntd= | ||
| + | |all_trans=MGI:1923965 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-30 | |distance_to_tss=-30 | ||
|end=101279188 | |end=101279188 | ||
| + | |end_of_center_position=101279173 | ||
|entrez_id=68107 | |entrez_id=68107 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=1700051C09Rik | + | |gene_alias=1700051C09Rik{{!}}4921513J16Rik{{!}}5430417M23Rik{{!}}Cntd |
|gene_description=cyclin N-terminal domain containing 1 | |gene_description=cyclin N-terminal domain containing 1 | ||
|gene_id=68107 | |gene_id=68107 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_026562 | |nearest_refseq=NM_026562 | ||
|nearest_unigene=Mm.262369 | |nearest_unigene=Mm.262369 | ||
| − | |num_trans= | + | |num_trans=68107 |
|species=mouse | |species=mouse | ||
|start=101279157 | |start=101279157 | ||
| + | |start_of_center_position=101279172 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC006866 | |transcript_name=BC006866 | ||
Latest revision as of 19:22, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101279172 |
|---|---|
| End of the center position in the TSS region: | 101279173 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC006866 |
|---|---|
| Distance: | -14 |
| Num_trans: | 68107 |
| All_trans: | MGI:1923965 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_026562 |
| Entrez ID: | 68107 |
| Nearest Unigene: | Mm.262369 |
| Nearest Refseq: | NM_026562 |
| Nearest Ensembl: | ENSMUSG00000078653 |
| Gene Name: | cyclin N-terminal domain containing 1 |
| Gene Alias: | 1700051C09Rik|4921513J16Rik|5430417M23Rik|Cntd |
| Gene Description: | cyclin N-terminal domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
