Difference between revisions of "TSS:Mm 99292.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF115411:-35 BC080857:-44 NM_009675:-205 uc007lop.2:-205 ENSMUST00000103105.9:-206 AF054831:-206 ENSMUST00000017316.6:249 uc007loq.1:249 AK040729:249 |c...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |VAP1= |
| + | |all_trans=MGI:1306797 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=209 | |distance_to_tss=209 | ||
|end=101330820 | |end=101330820 | ||
| + | |end_of_center_position=101330816 | ||
|entrez_id=11754 | |entrez_id=11754 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=SSAO | + | |gene_alias=SSAO{{!}}VAP1 |
| − | |gene_description= | + | |gene_description=amine oxidase, copper containing 3 |
|gene_id=11754 | |gene_id=11754 | ||
| − | |gene_name= | + | |gene_name=amine oxidase, copper containing 3 |
|gene_source=MGI:1306797 | |gene_source=MGI:1306797 | ||
|gene_symbol=Aoc3 | |gene_symbol=Aoc3 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_009675 | |nearest_refseq=NM_009675 | ||
|nearest_unigene=Mm.67281 | |nearest_unigene=Mm.67281 | ||
| − | |num_trans= | + | |num_trans=11754 |
|species=mouse | |species=mouse | ||
|start=101330810 | |start=101330810 | ||
| + | |start_of_center_position=101330815 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AF115411 | |transcript_name=AF115411 | ||
Latest revision as of 19:23, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101330815 |
|---|---|
| End of the center position in the TSS region: | 101330816 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF115411 |
|---|---|
| Distance: | -35 |
| Num_trans: | 11754 |
| All_trans: | MGI:1306797 |
TATA-Box annotation
| Distance to TSS: | 209 |
|---|---|
| Nearest PromoterID: | NM_009675 |
| Entrez ID: | 11754 |
| Nearest Unigene: | Mm.67281 |
| Nearest Refseq: | NM_009675 |
| Nearest Ensembl: | ENSMUSG00000019326 |
| Gene Name: | amine oxidase, copper containing 3 |
| Gene Alias: | SSAO|VAP1 |
| Gene Description: | amine oxidase, copper containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
