Difference between revisions of "TSS:Mm 99372.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000176722.7:11 ENSMUST00000175972.1:16 |chr=chr11 |cpg_percent=0.05 |distance=11 |distance_to_tss=529 |end=101984268 |entrez_id=72349 |gc_perce...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |5031436O03Rik= |
| + | |T-DSP11= | ||
| + | |VHR= | ||
| + | |all_trans=MGI:1922687 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=529 | |distance_to_tss=529 | ||
|end=101984268 | |end=101984268 | ||
| + | |end_of_center_position=101984262 | ||
|entrez_id=72349 | |entrez_id=72349 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=2210015O03Rik | + | |gene_alias=2210015O03Rik{{!}}5031436O03Rik{{!}}T-DSP11{{!}}VHR |
|gene_description=dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) | |gene_description=dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) | ||
|gene_id=75437 | |gene_id=75437 | ||
| − | |gene_name= | + | |gene_name=CFAP97 domain containing 1 |
|gene_source=MGI:1922687 | |gene_source=MGI:1922687 | ||
| − | |gene_symbol= | + | |gene_symbol=Cfap97d1 |
| − | |gene_synonyms= | + | |gene_synonyms=1700006E09Rik |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1922687 | |hgnc_mgi_id=MGI:1922687 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_028207 | |nearest_refseq=NM_028207 | ||
|nearest_unigene=Mm.196295 | |nearest_unigene=Mm.196295 | ||
| − | |num_trans= | + | |num_trans=75437 |
|species=mouse | |species=mouse | ||
|start=101984255 | |start=101984255 | ||
| + | |start_of_center_position=101984261 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000176722.7 | |transcript_name=ENSMUST00000176722.7 | ||
Latest revision as of 19:24, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101984261 |
|---|---|
| End of the center position in the TSS region: | 101984262 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000176722.7 |
|---|---|
| Distance: | 11 |
| Num_trans: | 75437 |
| All_trans: | MGI:1922687 |
TATA-Box annotation
| Distance to TSS: | 529 |
|---|---|
| Nearest PromoterID: | NM_028207 |
| Entrez ID: | 72349 |
| Nearest Unigene: | Mm.196295 |
| Nearest Refseq: | NM_028207 |
| Nearest Ensembl: | ENSMUSG00000003518 |
| Gene Name: | CFAP97 domain containing 1 |
| Gene Alias: | 2210015O03Rik|5031436O03Rik|T-DSP11|VHR |
| Gene Description: | dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
