Difference between revisions of "TSS:Mm 99395.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000147252.1:0 uc007lqq.2:0 AK075765:0 |chr=chr11 |cpg_percent=0.03 |distance=0 |distance_to_tss=848 |end=102146383 |entrez_id=217214 |gc_percen...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2387600 |
| + | |argA= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=848 | |distance_to_tss=848 | ||
|end=102146383 | |end=102146383 | ||
| + | |end_of_center_position=102146362 | ||
|entrez_id=217214 | |entrez_id=217214 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=1700120E20Rik | + | |gene_alias=1700120E20Rik{{!}}argA |
|gene_description=N-acetylglutamate synthase | |gene_description=N-acetylglutamate synthase | ||
|gene_id=217214 | |gene_id=217214 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_145829 | |nearest_refseq=NM_145829 | ||
|nearest_unigene=Mm.31686 | |nearest_unigene=Mm.31686 | ||
| − | |num_trans= | + | |num_trans=217214 |
|species=mouse | |species=mouse | ||
|start=102146339 | |start=102146339 | ||
| + | |start_of_center_position=102146361 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-41(TGCTAGATAAGG,-,0.00) |
| − | |transcript_name=ENSMUST00000147252.1 | + | |transcript_name=ENSMUST00000147252.1 AK075765 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99395.1 | |tss_id=mm_99395.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:25, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 102146361 |
|---|---|
| End of the center position in the TSS region: | 102146362 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000147252.1 AK075765 |
|---|---|
| Distance: | 0 |
| Num_trans: | 217214 |
| All_trans: | MGI:2387600 |
TATA-Box annotation
| Distance to TSS: | 848 |
|---|---|
| Nearest PromoterID: | NM_145829 |
| Entrez ID: | 217214 |
| Nearest Unigene: | Mm.31686 |
| Nearest Refseq: | NM_145829 |
| Nearest Ensembl: | ENSMUSG00000048217 |
| Gene Name: | N-acetylglutamate synthase |
| Gene Alias: | 1700120E20Rik|argA |
| Gene Description: | N-acetylglutamate synthase |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -41(TGCTAGATAAGG,-,0.00) |
