Difference between revisions of "TSS:Mm 99545.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000124462.2:-13 NR_045346:-13 uc029rok.1:-13 AK157183:-13 |chr=chr11 |cpg_percent=0.015 |distance=-13 |distance_to_tss=36 |end=103344812 |entre...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Gm11648= |
| + | |OTTMUSG00000003073= | ||
| + | |all_trans=MGI:3650159 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=36 | |distance_to_tss=36 | ||
|end=103344812 | |end=103344812 | ||
| + | |end_of_center_position=103344789 | ||
|entrez_id=653030 | |entrez_id=653030 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=F830206d12rik | + | |gene_alias=F830206d12rik{{!}}Gm11648 |
| − | |gene_description= | + | |gene_description=Rho GTPase activating protein 27, opposite strand 3 |
|gene_id=653030 | |gene_id=653030 | ||
| − | |gene_name= | + | |gene_name=Rho GTPase activating protein 27, opposite strand 3 |
|gene_source=MGI:3650159 | |gene_source=MGI:3650159 | ||
|gene_symbol=Arhgap27os3 | |gene_symbol=Arhgap27os3 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NR_045346 | |nearest_refseq=NR_045346 | ||
|nearest_unigene=Mm.440684 | |nearest_unigene=Mm.440684 | ||
| − | |num_trans= | + | |num_trans=653030 |
|species=mouse | |species=mouse | ||
|start=103344765 | |start=103344765 | ||
| + | |start_of_center_position=103344788 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000124462.2 | + | |transcript_name=ENSMUST00000124462.2 AK157183 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99545.1 | |tss_id=mm_99545.1 | ||
Latest revision as of 19:28, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 103344788 |
|---|---|
| End of the center position in the TSS region: | 103344789 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000124462.2 AK157183 |
|---|---|
| Distance: | -13 |
| Num_trans: | 653030 |
| All_trans: | MGI:3650159 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NR_045346 |
| Entrez ID: | 653030 |
| Nearest Unigene: | Mm.440684 |
| Nearest Refseq: | NR_045346 |
| Nearest Ensembl: | ENSMUSG00000085887 |
| Gene Name: | Rho GTPase activating protein 27, opposite strand 3 |
| Gene Alias: | F830206d12rik|Gm11648 |
| Gene Description: | Rho GTPase activating protein 27, opposite strand 3 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
