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Difference between revisions of "TSS:Mm 99735.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000106816.7:79 NM_029345:79 uc007lyw.2:79 AK153786:79 ENSMUST00000188561.6:98 ENSMUST00000190795.6:98 ENSMUST00000185986.6:98 ENSMUST0000019026...")
 
 
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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000106816.7:79 NM_029345:79 uc007lyw.2:79 AK153786:79 ENSMUST00000188561.6:98 ENSMUST00000190795.6:98 ENSMUST00000185986.6:98 ENSMUST00000190268.1:98 BC116232:-411 BC116233:-411
+
|all_trans=MGI:1922823
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 6: Line 6:
 
|distance_to_tss=-85
 
|distance_to_tss=-85
 
|end=106374747
 
|end=106374747
 +
|end_of_center_position=106374741
 
|entrez_id=75573
 
|entrez_id=75573
 
|gc_percent=0.61194
 
|gc_percent=0.61194
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|nearest_refseq=NM_029345
 
|nearest_refseq=NM_029345
 
|nearest_unigene=Mm.159539
 
|nearest_unigene=Mm.159539
|num_trans=10
+
|num_trans=75573
 
|species=mouse
 
|species=mouse
 
|start=106374734
 
|start=106374734
 +
|start_of_center_position=106374740
 
|strand=+
 
|strand=+
|transcript_name=ENSMUST00000106816.7 NM_029345 uc007lyw.2 AK153786
+
|transcript_name=ENSMUST00000106816.7 AK153786
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_99735.1
 
|tss_id=mm_99735.1

Latest revision as of 19:32, 28 July 2021

Basic information about the TSS


TSS ID:mm_99735.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:106374734
End:106374747
Strand:+
TSS Score:1
Start of the center position in the TSS region:106374740
End of the center position in the TSS region:106374741



Gene and protein annotation


Transcript_name:ENSMUST00000106816.7 AK153786
Distance:79
GeneID:75573
HGNC/MGI_ID:MGI:1922823
UniProt_ID:B1ARI9
Gene_name:proline rich 29
Gene_symbol:Prr29
Gene_synonyms:2310007L24Rik
Gene_source:MGI:1922823



Transcript annotation


Transcript_name:ENSMUST00000106816.7 AK153786
Distance:79
Num_trans:75573
All_trans:MGI:1922823



TATA-Box annotation


Distance to TSS:-85
Nearest PromoterID:NM_029345
Entrez ID:75573
Nearest Unigene:Mm.159539
Nearest Refseq:NM_029345
Nearest Ensembl:ENSMUSG00000009210
Gene Name:proline rich 29
Gene Alias:2310007L24Rik
Gene Description:proline rich 29
Gene Type:protein-coding
CpG%:0.025
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):