Difference between revisions of "TSS:Mm 99808.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000152958.7:-27 ENSMUST00000146050.1:-32 |chr=chr11 |cpg_percent=0.01 |distance=-27 |distance_to_tss=-14098 |end=108381202 |entrez_id=11818 |gc...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:88058 |
| + | |beta-2-GPI= | ||
| + | |beta2-GPI= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-14098 | |distance_to_tss=-14098 | ||
|end=108381202 | |end=108381202 | ||
| + | |end_of_center_position=108381199 | ||
|entrez_id=11818 | |entrez_id=11818 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=B2GPI | + | |gene_alias=B2GPI{{!}}beta-2-GPI{{!}}beta2-GPI |
|gene_description=apolipoprotein H | |gene_description=apolipoprotein H | ||
|gene_id=11818 | |gene_id=11818 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_013475 | |nearest_refseq=NM_013475 | ||
|nearest_unigene=Mm.2266 | |nearest_unigene=Mm.2266 | ||
| − | |num_trans= | + | |num_trans=11818 |
|species=mouse | |species=mouse | ||
|start=108381195 | |start=108381195 | ||
| + | |start_of_center_position=108381198 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-51(CCTTTTAGGAGG,+,0.00) |
|transcript_name=ENSMUST00000152958.7 | |transcript_name=ENSMUST00000152958.7 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 19:34, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 108381198 |
|---|---|
| End of the center position in the TSS region: | 108381199 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000152958.7 |
|---|---|
| Distance: | -27 |
| Num_trans: | 11818 |
| All_trans: | MGI:88058 |
TATA-Box annotation
| Distance to TSS: | -14098 |
|---|---|
| Nearest PromoterID: | NM_013475 |
| Entrez ID: | 11818 |
| Nearest Unigene: | Mm.2266 |
| Nearest Refseq: | NM_013475 |
| Nearest Ensembl: | ENSMUSG00000000049 |
| Gene Name: | apolipoprotein H |
| Gene Alias: | B2GPI|beta-2-GPI|beta2-GPI |
| Gene Description: | apolipoprotein H |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -51(CCTTTTAGGAGG,+,0.00) |
