Difference between revisions of "TSS:Mm 99820.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000106724.9:0 NM_029586:0 AK005611:0 AK006504:0 BC048677:0 ENSMUST00000106715.7:-6 NM_145688:-6 uc007mbs.1:-6 uc007mbt.1:-6 ENSMUST00000106718....") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |1700029K01Rik= |
| + | |8430407H02Rik= | ||
| + | |AV043680= | ||
| + | |AV207351= | ||
| + | |Ccdc46= | ||
| + | |Macoco= | ||
| + | |all_trans=MGI:1923673 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=9 | |distance_to_tss=9 | ||
|end=108682639 | |end=108682639 | ||
| + | |end_of_center_position=108682627 | ||
|entrez_id=76380 | |entrez_id=76380 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=1700001M19Rik | + | |gene_alias=1700001M19Rik{{!}}1700029K01Rik{{!}}8430407H02Rik{{!}}AV043680{{!}}AV207351{{!}}Ccdc46{{!}}Macoco |
|gene_description=centrosomal protein 112 | |gene_description=centrosomal protein 112 | ||
|gene_id=76380 | |gene_id=76380 | ||
| Line 21: | Line 28: | ||
|nearest_refseq=NM_029586 | |nearest_refseq=NM_029586 | ||
|nearest_unigene=Mm.344071 | |nearest_unigene=Mm.344071 | ||
| − | |num_trans= | + | |num_trans=76380 |
|species=mouse | |species=mouse | ||
|start=108682614 | |start=108682614 | ||
| + | |start_of_center_position=108682626 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000106724.9 | + | |transcript_name=ENSMUST00000106724.9 AK005611 AK006504 BC048677 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_99820.1 | |tss_id=mm_99820.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9DAQ8 | |uniprot_id=Q9DAQ8 | ||
}} | }} | ||
Latest revision as of 19:34, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 108682626 |
|---|---|
| End of the center position in the TSS region: | 108682627 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106724.9 AK005611 AK006504 BC048677 |
|---|---|
| Distance: | 0 |
| Num_trans: | 76380 |
| All_trans: | MGI:1923673 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_029586 |
| Entrez ID: | 76380 |
| Nearest Unigene: | Mm.344071 |
| Nearest Refseq: | NM_029586 |
| Nearest Ensembl: | ENSMUSG00000020728 |
| Gene Name: | centrosomal protein 112 |
| Gene Alias: | 1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco |
| Gene Description: | centrosomal protein 112 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
