Difference between revisions of "TSS:Hg 103635.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SPC= | ||
| + | |UCNIII= | ||
| + | |all_trans=HGNC:17781 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss= | + | |distance=-8 |
| + | |distance_to_tss=138 | ||
| + | |end=5365109 | ||
| + | |end_of_center_position=5365105 | ||
|entrez_id=114131 | |entrez_id=114131 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=SCP | + | |gene_alias=SCP{{!}}SPC{{!}}UCNIII |
|gene_description=urocortin 3 | |gene_description=urocortin 3 | ||
| − | |gene_name=UCN3 | + | |gene_id=114131 |
| + | |gene_name=urocortin 3 | ||
| + | |gene_source=HGNC:17781 | ||
| + | |gene_symbol=UCN3 | ||
| + | |gene_synonyms=SPC UCNIII | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17781 | ||
|nearest_ensembl=ENSG00000178473 | |nearest_ensembl=ENSG00000178473 | ||
|nearest_promoter_id=NM_053049 | |nearest_promoter_id=NM_053049 | ||
|nearest_refseq=NM_053049 | |nearest_refseq=NM_053049 | ||
|nearest_unigene=Hs.511775 | |nearest_unigene=Hs.511775 | ||
| + | |num_trans=114131 | ||
| + | |species=human | ||
| + | |start=5365099 | ||
| + | |start_of_center_position=5365104 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC100867 BC100868 BC100869 BC100870 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103635.1 | |tss_id=hg_103635.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:52, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5365104 |
|---|---|
| End of the center position in the TSS region: | 5365105 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC100867 BC100868 BC100869 BC100870 |
|---|---|
| Distance: | -8 |
| Num_trans: | 114131 |
| All_trans: | HGNC:17781 |
TATA-Box annotation
| Distance to TSS: | 138 |
|---|---|
| Nearest PromoterID: | NM_053049 |
| Entrez ID: | 114131 |
| Nearest Unigene: | Hs.511775 |
| Nearest Refseq: | NM_053049 |
| Nearest Ensembl: | ENSG00000178473 |
| Gene Name: | urocortin 3 |
| Gene Alias: | SCP|SPC|UCNIII |
| Gene Description: | urocortin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
