Difference between revisions of "TSS:Hg 100161.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=1748 |entrez_id=6194 |gc_percent=0.402985 |gene_alias=S6 |gene_description=ribosomal protein S6 |gene_name=RPS6 |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=-323 |
| + | |distance_to_tss=1747 | ||
| + | |end=19378516 | ||
| + | |end_of_center_position=19378489 | ||
|entrez_id=6194 | |entrez_id=6194 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=S6 | |gene_alias=S6 | ||
|gene_description=ribosomal protein S6 | |gene_description=ribosomal protein S6 | ||
| + | |gene_id= | ||
|gene_name=RPS6 | |gene_name=RPS6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000137154 | |nearest_ensembl=ENSG00000137154 | ||
|nearest_promoter_id=NM_001010 | |nearest_promoter_id=NM_001010 | ||
|nearest_refseq=NM_001010 | |nearest_refseq=NM_001010 | ||
|nearest_unigene=Hs.408073 | |nearest_unigene=Hs.408073 | ||
| + | |num_trans= | ||
| + | |species=human | ||
| + | |start=19378461 | ||
| + | |start_of_center_position=19378488 | ||
| + | |strand=- | ||
| + | |transcript_name=AF274945 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100161.1 | |tss_id=hg_100161.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9BZU1 | ||
}} | }} | ||
Latest revision as of 17:37, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19378488 |
|---|---|
| End of the center position in the TSS region: | 19378489 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF274945 |
|---|---|
| Distance: | -323 |
| Num_trans: | |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1747 |
|---|---|
| Nearest PromoterID: | NM_001010 |
| Entrez ID: | 6194 |
| Nearest Unigene: | Hs.408073 |
| Nearest Refseq: | NM_001010 |
| Nearest Ensembl: | ENSG00000137154 |
| Gene Name: | RPS6 |
| Gene Alias: | S6 |
| Gene Description: | ribosomal protein S6 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
