Difference between revisions of "TSS:Hg 103728.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:44691 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=-6 | |distance_to_tss=-6 | ||
| + | |end=6779601 | ||
| + | |end_of_center_position=6779593 | ||
|entrez_id=100507127 | |entrez_id=100507127 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 707 | |gene_description=long intergenic non-protein coding RNA 707 | ||
| − | |gene_name=LINC00707 | + | |gene_id=100507127 |
| + | |gene_name=long intergenic non-protein coding RNA 707 | ||
| + | |gene_source=HGNC:44691 | ||
| + | |gene_symbol=LINC00707 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:44691 | ||
|nearest_ensembl=ENSG00000238266 | |nearest_ensembl=ENSG00000238266 | ||
|nearest_promoter_id=NR_038291 | |nearest_promoter_id=NR_038291 | ||
|nearest_refseq=NR_038291 | |nearest_refseq=NR_038291 | ||
|nearest_unigene=Hs.498571 | |nearest_unigene=Hs.498571 | ||
| + | |num_trans=100507127 | ||
| + | |species=human | ||
| + | |start=6779583 | ||
| + | |start_of_center_position=6779592 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000649625.1 ENST00000650412.1 ENST00000648398.1 AK094154 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103728.1 | |tss_id=hg_103728.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:54, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6779592 |
|---|---|
| End of the center position in the TSS region: | 6779593 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000649625.1 ENST00000650412.1 ENST00000648398.1 AK094154 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100507127 |
| All_trans: | HGNC:44691 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NR_038291 |
| Entrez ID: | 100507127 |
| Nearest Unigene: | Hs.498571 |
| Nearest Refseq: | NR_038291 |
| Nearest Ensembl: | ENSG00000238266 |
| Gene Name: | long intergenic non-protein coding RNA 707 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 707 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
