Difference between revisions of "TSS:Hg 103820.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=72156 |entrez_id=105755953 |gc_percent=0.437811 |gene_alias=- |gene_description=uncharacterized LOC105755953 |gene_name=LOC10575595...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000456526.1:-18 LP895776:-18 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=-18 | ||
|distance_to_tss=72156 | |distance_to_tss=72156 | ||
| + | |end=8970148 | ||
| + | |end_of_center_position=8970146 | ||
|entrez_id=105755953 | |entrez_id=105755953 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2676 |
| − | |gene_name= | + | |gene_name=LINC02676 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000234752 | |nearest_ensembl=ENSG00000234752 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NR_131944 | |nearest_refseq=NR_131944 | ||
|nearest_unigene=Hs.564146 | |nearest_unigene=Hs.564146 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=8970142 | ||
| + | |start_of_center_position=8970145 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000456526.1 LP895776 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103820.1 | |tss_id=hg_103820.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:35, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8970145 |
|---|---|
| End of the center position in the TSS region: | 8970146 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000456526.1 LP895776 |
|---|---|
| Distance: | -18 |
| Num_trans: | 2 |
| All_trans: | ENST00000456526.1:-18 LP895776:-18 |
TATA-Box annotation
| Distance to TSS: | 72156 |
|---|---|
| Nearest PromoterID: | NR_131944 |
| Entrez ID: | 105755953 |
| Nearest Unigene: | Hs.564146 |
| Nearest Refseq: | NR_131944 |
| Nearest Ensembl: | ENSG00000234752 |
| Gene Name: | LINC02676 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2676 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
