Difference between revisions of "TSS:Hg 103880.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=81705 |entrez_id=414196 |gc_percent=0.328358 |gene_alias=C10orf31 |gene_description=CELF2 antisense RNA 1 |gene_name=CELF2-AS1 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=NA | ||
|distance_to_tss=81705 | |distance_to_tss=81705 | ||
| + | |end=11262970 | ||
| + | |end_of_center_position=11262969 | ||
|entrez_id=414196 | |entrez_id=414196 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_001012713 | |nearest_refseq=NM_001012713 | ||
|nearest_unigene=Hs.729598 | |nearest_unigene=Hs.729598 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=11262967 | ||
| + | |start_of_center_position=11262968 | ||
| + | |strand=+ | ||
| + | |tata_box=-49(TGCTTTTAAAAG,-,0.00),-48(GCTTTTAAAAGT,+,0.00),-47(CTTTTAAAAGTG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103880.1 | |tss_id=hg_103880.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:37, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11262968 |
|---|---|
| End of the center position in the TSS region: | 11262969 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 81705 |
|---|---|
| Nearest PromoterID: | NR_126062 |
| Entrez ID: | 414196 |
| Nearest Unigene: | Hs.729598 |
| Nearest Refseq: | NM_001012713 |
| Nearest Ensembl: | |
| Gene Name: | CELF2-AS1 |
| Gene Alias: | C10orf31 |
| Gene Description: | CELF2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -49(TGCTTTTAAAAG,-,0.00),-48(GCTTTTAAAAGT,+,0.00),-47(CTTTTAAAAGTG,+,0.00) |
