Difference between revisions of "TSS:Hg 119557.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:8572 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=504 | |distance_to_tss=504 | ||
|end=47185389 | |end=47185389 | ||
| + | |end_of_center_position=47185377 | ||
|entrez_id=29763 | |entrez_id=29763 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_016223 | |nearest_refseq=NM_016223 | ||
|nearest_unigene=Hs.334639 | |nearest_unigene=Hs.334639 | ||
| − | |num_trans= | + | |num_trans=29763 |
|species=human | |species=human | ||
|start=47185364 | |start=47185364 | ||
| + | |start_of_center_position=47185376 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000525725.5 | + | |transcript_name=ENST00000525725.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_119557.1 | |tss_id=hg_119557.1 | ||
Latest revision as of 00:38, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47185376 |
|---|---|
| End of the center position in the TSS region: | 47185377 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000525725.5 |
|---|---|
| Distance: | -30 |
| Num_trans: | 29763 |
| All_trans: | HGNC:8572 |
TATA-Box annotation
| Distance to TSS: | 504 |
|---|---|
| Nearest PromoterID: | NM_001184975 |
| Entrez ID: | 29763 |
| Nearest Unigene: | Hs.334639 |
| Nearest Refseq: | NM_016223 |
| Nearest Ensembl: | ENSG00000165912 |
| Gene Name: | protein kinase C and casein kinase substrate in neurons 3 |
| Gene Alias: | SDPIII |
| Gene Description: | protein kinase C and casein kinase substrate in neurons 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
