Difference between revisions of "TSS:Hg 104005.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:30329 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance_to_tss= | + | |distance=-125 |
| − | |entrez_id= | + | |distance_to_tss=411 |
| + | |end=15097783 | ||
| + | |end_of_center_position=15097766 | ||
| + | |entrez_id=10557 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=ribonuclease P/MRP subunit p38 |
| − | |gene_name= | + | |gene_id=10557 |
| + | |gene_name=ribonuclease P/MRP subunit p38 | ||
| + | |gene_source=HGNC:30329 | ||
| + | |gene_symbol=RPP38 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:30329 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000152464 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_006414 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_006414 |
| + | |nearest_unigene=Hs.94986 | ||
| + | |num_trans=10557 | ||
| + | |species=human | ||
| + | |start=15097748 | ||
| + | |start_of_center_position=15097765 | ||
| + | |strand=+ | ||
| + | |transcript_name=AF079567 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104005.1 | |tss_id=hg_104005.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:00, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 15097765 |
|---|---|
| End of the center position in the TSS region: | 15097766 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF079567 |
|---|---|
| Distance: | -125 |
| Num_trans: | 10557 |
| All_trans: | HGNC:30329 |
TATA-Box annotation
| Distance to TSS: | 411 |
|---|---|
| Nearest PromoterID: | NM_006414 |
| Entrez ID: | 10557 |
| Nearest Unigene: | Hs.94986 |
| Nearest Refseq: | NM_006414 |
| Nearest Ensembl: | ENSG00000152464 |
| Gene Name: | ribonuclease P/MRP subunit p38 |
| Gene Alias: | - |
| Gene Description: | ribonuclease P/MRP subunit p38 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
