Difference between revisions of "TSS:Hg 104008.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-21553 |entrez_id=221061 |gc_percent=0.547264 |gene_alias=C10orf38 |gene_description=family with sequence similarity 171 member...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-21323 | ||
| + | |end=15392614 | ||
| + | |end_of_center_position=15392613 | ||
|entrez_id=221061 | |entrez_id=221061 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=C10orf38 | + | |gene_alias=APCN{{!}}C10orf38 |
|gene_description=family with sequence similarity 171 member A1 | |gene_description=family with sequence similarity 171 member A1 | ||
|gene_name=FAM171A1 | |gene_name=FAM171A1 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_001010924 | |nearest_refseq=NM_001010924 | ||
|nearest_unigene=Hs.66762 | |nearest_unigene=Hs.66762 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=15392610 | ||
| + | |start_of_center_position=15392612 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104008.1 | |tss_id=hg_104008.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 15392612 |
|---|---|
| End of the center position in the TSS region: | 15392613 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -21323 |
|---|---|
| Nearest PromoterID: | NM_001010924 |
| Entrez ID: | 221061 |
| Nearest Unigene: | Hs.66762 |
| Nearest Refseq: | NM_001010924 |
| Nearest Ensembl: | ENSG00000148468 |
| Gene Name: | FAM171A1 |
| Gene Alias: | APCN|C10orf38 |
| Gene Description: | family with sequence similarity 171 member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
