Difference between revisions of "TSS:Hg 120054.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LLCDL3= | |LLCDL3= | ||
| − | |all_trans= | + | |all_trans=HGNC:3576 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=-53 | |distance_to_tss=-53 | ||
|end=61891607 | |end=61891607 | ||
| + | |end_of_center_position=61891599 | ||
|entrez_id=3995 | |entrez_id=3995 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=CYB5RP | + | |gene_alias=CYB5RP{{!}}LLCDL3 |
|gene_description=fatty acid desaturase 3 | |gene_description=fatty acid desaturase 3 | ||
|gene_id=3995 | |gene_id=3995 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_021727 | |nearest_refseq=NM_021727 | ||
|nearest_unigene=Hs.21765 | |nearest_unigene=Hs.21765 | ||
| − | |num_trans= | + | |num_trans=3995 |
|species=human | |species=human | ||
|start=61891589 | |start=61891589 | ||
| + | |start_of_center_position=61891598 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000278829.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_120054.1 | |tss_id=hg_120054.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q9Y5Q0 | + | |uniprot_id=A0A024R564 Q9Y5Q0 |
}} | }} | ||
Latest revision as of 00:49, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 61891598 |
|---|---|
| End of the center position in the TSS region: | 61891599 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000278829.7 |
|---|---|
| Distance: | 45 |
| Num_trans: | 3995 |
| All_trans: | HGNC:3576 |
TATA-Box annotation
| Distance to TSS: | -53 |
|---|---|
| Nearest PromoterID: | NM_021727 |
| Entrez ID: | 3995 |
| Nearest Unigene: | Hs.21765 |
| Nearest Refseq: | NM_021727 |
| Nearest Ensembl: | ENSG00000221968 |
| Gene Name: | fatty acid desaturase 3 |
| Gene Alias: | CYB5RP|LLCDL3 |
| Gene Description: | fatty acid desaturase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
