Difference between revisions of "TSS:Hg 104063.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF346177:0 MA581754:0 LF346179:109 MA581756:109 LF346181:176 MA581758:176 ENST00000495528.1:-352 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=0 | ||
|distance_to_tss=-3634 | |distance_to_tss=-3634 | ||
| + | |end=17233661 | ||
| + | |end_of_center_position=17233619 | ||
|entrez_id=100507347 | |entrez_id=100507347 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=VIM antisense RNA 1 | |gene_description=VIM antisense RNA 1 | ||
| + | |gene_id=7431 | ||
|gene_name=VIM-AS1 | |gene_name=VIM-AS1 | ||
| + | |gene_source=HGNC:12692 | ||
| + | |gene_symbol=VIM | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:12692 | ||
|nearest_ensembl=ENSG00000229124 | |nearest_ensembl=ENSG00000229124 | ||
|nearest_promoter_id=NR_108061 | |nearest_promoter_id=NR_108061 | ||
|nearest_refseq=NR_108060 | |nearest_refseq=NR_108060 | ||
|nearest_unigene=Hs.740502 | |nearest_unigene=Hs.740502 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=17233576 | ||
| + | |start_of_center_position=17233618 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF346177 MA581754 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104063.1 | |tss_id=hg_104063.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:41, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17233618 |
|---|---|
| End of the center position in the TSS region: | 17233619 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF346177 MA581754 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | LF346177:0 MA581754:0 LF346179:109 MA581756:109 LF346181:176 MA581758:176 ENST00000495528.1:-352 |
TATA-Box annotation
| Distance to TSS: | -3634 |
|---|---|
| Nearest PromoterID: | NR_108061 |
| Entrez ID: | 100507347 |
| Nearest Unigene: | Hs.740502 |
| Nearest Refseq: | NR_108060 |
| Nearest Ensembl: | ENSG00000229124 |
| Gene Name: | VIM-AS1 |
| Gene Alias: | - |
| Gene Description: | VIM antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
