Difference between revisions of "TSS:Hg 1041.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=85514 |entrez_id=5081 |gc_percent=0.512438 |gene_alias=HUP1|PAX7B|RMS2 |gene_description=paired box 7 |gene_name=PAX7 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PAX7B= | ||
| + | |RMS2= | ||
| + | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=85674 | ||
| + | |end=18716521 | ||
| + | |end_of_center_position=18716520 | ||
|entrez_id=5081 | |entrez_id=5081 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=HUP1 | + | |gene_alias=HUP1{{!}}PAX7B{{!}}RMS2 |
|gene_description=paired box 7 | |gene_description=paired box 7 | ||
|gene_name=PAX7 | |gene_name=PAX7 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_002584 | |nearest_refseq=NM_002584 | ||
|nearest_unigene=Hs.113253 | |nearest_unigene=Hs.113253 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=18716518 | ||
| + | |start_of_center_position=18716519 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_1041.1 | |tss_id=hg_1041.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:42, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 18716519 |
|---|---|
| End of the center position in the TSS region: | 18716520 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 85674 |
|---|---|
| Nearest PromoterID: | NM_002584 |
| Entrez ID: | 5081 |
| Nearest Unigene: | Hs.113253 |
| Nearest Refseq: | NM_002584 |
| Nearest Ensembl: | ENSG00000009709 |
| Gene Name: | PAX7 |
| Gene Alias: | HUP1|PAX7B|RMS2 |
| Gene Description: | paired box 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
